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GitHub / RIVM-IIV-Microbiome / biomeUtils

biomeUtils is Module-01 of the RIVM-ToolBox. R pkg with common utilities for microbiome research done at the RIVM.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/RIVM-IIV-Microbiome%2FbiomeUtils

Stars: 3
Forks: 0
Open Issues: 1

License: other
Language: R
Repo Size: 4.9 MB
Dependencies: 25

Created: about 3 years ago
Updated: over 1 year ago
Last pushed: 10 months ago
Last synced: 9 months ago

Topics: microbiome, microbiome-analysis, microbiota

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Dependencies

DESCRIPTION cran

R >= 3.6.0 depends
microbiome * depends
phyloseq * depends
Biobase * imports
Biostrings * imports
DECIPHER * imports
data.table * imports
dplyr * imports
ggplot2 * imports
methods * imports
phangorn * imports
picante * imports
readr * imports
rlang * imports
tibble * imports
tidyr * imports
knitr * suggests
remotes * suggests
rmarkdown * suggests
testthat * suggests

.github/workflows/rcmdcheck.yml actions

actions/cache v1 composite
actions/checkout v2 composite
actions/upload-artifact master composite
r-lib/actions/setup-pandoc master composite
r-lib/actions/setup-r master composite