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GitHub / apetkau / genomics-data-index-evaluation-manuscript
Stars: 0
Forks: 0
Open Issues: 0
License: apache-2.0
Language: Jupyter Notebook
Repo Size: 37.9 MB
Dependencies:
52
Created: over 1 year ago
Updated: 10 months ago
Last pushed: over 1 year ago
Last synced: 10 months ago
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Dependencies
- bamtools
- bcftools >=1.13
- bedtools
- bioconductor-rhtslib
- ca-certificates
- certifi
- htslib >=1.13
- iqtree
- jupyterlab
- matplotlib
- minimap2 2.22
- openssl
- papermill
- pip
- pymongo
- pyqt
- python 3.8.*
- r-ape
- r-irkernel
- r-phangorn
- r-phytools
- r-sf
- samtools >=1.13
- seaborn
- setuptools 57.*
- snpeff
- sqlalchemy >=1.4
- udunits2