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GitHub / aswinvisva / VesTro-MIBI
Toolbox for MIBI data analysis
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aswinvisva%2FVesTro-MIBI
Stars: 1
Forks: 0
Open Issues: 11
License: None
Language: Python
Repo Size: 63.5 MB
Dependencies:
137
Created: about 4 years ago
Updated: about 3 years ago
Last pushed: over 1 year ago
Last synced: about 1 year ago
Files
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Readme
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Dependencies
- matplotlib ==2.2.5
- opencv-python ==3.4.2.17
- pandas ==0.24.2
- tifffile ==2019.7.26.2
requirements.txt
pypi
- Box2D ==2.3.10
- Cython ==0.29.22
- Flask ==1.1.2
- FlowCytometryTools ==0.5.0
- FlowSom ==0.1.1
- Jinja2 ==2.11.2
- Keras-Applications ==1.0.8
- Keras-Preprocessing ==1.1.0
- Mako ==1.0.7
- Markdown ==3.2.1
- MarkupSafe ==1.1.1
- Pillow ==8.0.1
- PyWavelets ==1.1.1
- Pygments ==2.7.3
- QtPy ==1.9.0
- SecretStorage ==2.3.1
- Send2Trash ==1.5.0
- Werkzeug ==1.0.0
- absl-py ==0.9.0
- argon2-cffi ==20.1.0
- asn1crypto ==0.24.0
- astor ==0.8.1
- astropy ==4.2.1
- astunparse ==1.6.3
- async-generator ==1.10
- attrs ==20.3.0
- backcall ==0.2.0
- bleach ==3.2.1
- cachetools ==4.1.0
- certifi ==2020.6.20
- cffi ==1.14.4
- chardet ==3.0.4
- click ==7.1.2
- coverage ==5.5
- cryptography ==3.4.6
- cycler ==0.10.0
- decorator ==4.4.2
- defusedxml ==0.6.0
- entrypoints ==0.3
- fcsparser ==0.2.1
- future ==0.18.2
- gast ==0.3.3
- google-auth ==1.16.0
- google-auth-oauthlib ==0.4.1
- google-pasta ==0.1.8
- grpcio ==1.27.2
- h5py ==2.10.0
- hdbscan ==0.8.27
- httplib2 ==0.9.2
- idna ==2.6
- imageio ==2.9.0
- importlib-metadata ==3.3.0
- ipykernel ==5.4.2
- ipython ==7.19.0
- ipython-genutils ==0.2.0
- ipywidgets ==7.6.2
- itsdangerous ==1.1.0
- jedi ==0.18.0
- joblib ==1.0.1
- jsonschema ==3.2.0
- jupyter ==1.0.0
- jupyter-client ==6.1.7
- jupyter-console ==6.2.0
- jupyter-core ==4.7.0
- jupyterlab-pygments ==0.1.2
- jupyterlab-widgets ==1.0.0
- keyring ==10.6.0
- keyrings.alt ==3.0
- kiwisolver ==1.3.1
- launchpadlib ==1.10.6
- lazr.restfulclient ==0.13.5
- lazr.uri ==1.0.3
- llvmlite ==0.35.0
- matplotlib ==3.3.2
- mistune ==0.8.4
- nbclient ==0.5.1
- nbconvert ==6.0.7
- nbformat ==5.0.8
- nest-asyncio ==1.4.3
- networkx ==2.5
- notebook ==6.1.6
- numba ==0.52.0
- numpy ==1.20.1
- oauth ==1.0.1
- oauthlib ==3.1.0
- opencv-python ==4.5.1.48
- packaging ==20.8
- pandas ==1.2.0
- pandocfilters ==1.4.3
- parso ==0.8.1
- pbr ==5.5.1
- pexpect ==4.8.0
- pickleshare ==0.7.5
- prometheus-client ==0.9.0
- prompt-toolkit ==3.0.8
- ptyprocess ==0.7.0
- pyasn1 ==0.4.8
- pyasn1-modules ==0.2.8
- pycparser ==2.20
- pyerfa ==1.7.2
- pynndescent ==0.5.2
- pyparsing ==2.4.7
- pyrsistent ==0.17.3
- python-dateutil ==2.8.1
- pytz ==2018.3
- pyzmq ==20.0.0
- qtconsole ==5.0.1
- requests ==2.23.0
- requests-oauthlib ==1.3.0
- rsa ==4.0
- scikit-image ==0.18.1
- scikit-learn ==0.22.2.post1
- scipy ==1.4.1
- seaborn ==0.11.1
- six ==1.15.0
- tabulate ==0.8.9
- terminado ==0.9.1
- testpath ==0.4.4
- testresources ==2.0.1
- tifffile ==2021.3.5
- tornado ==6.1
- tqdm ==4.59.0
- traitlets ==5.0.5
- umap-learn ==0.5.1
- urllib3 ==1.22
- wadllib ==1.3.2
- wcwidth ==0.2.5
- webencodings ==0.5.1
- widgetsnbextension ==3.5.1
- zipp ==3.4.0
.github/workflows/python-app.yml
actions
- actions/checkout v2 composite
- actions/setup-python v2 composite
Dockerfile
docker
- python 3.8.5 build