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GitHub / dmcable / spacexr
Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial transcriptomics
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dmcable%2Fspacexr
Stars: 225
Forks: 65
Open Issues: 22
License: gpl-3.0
Language: HTML
Repo Size: 537 MB
Dependencies:
19
Created: over 4 years ago
Updated: 7 months ago
Last pushed: 6 months ago
Last synced: 6 months ago
Topics: cell-type-identification, differential-expression, spatial-transcriptomics
Files
Dependencies
- R >= 3.5.0 depends
- CompQuadForm * imports
- Matrix * imports
- Rfast * imports
- doParallel * imports
- dplyr * imports
- fields * imports
- foreach * imports
- ggplot2 * imports
- knitr * imports
- locfdr * imports
- mgcv * imports
- pals * imports
- parallel * imports
- quadprog * imports
- readr * imports
- reshape2 * imports
- rmarkdown * imports
- tibble * imports