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GitHub / donnafarberlab / MMoCHi
MultiModal Classifier Hierarchy (MMoCHi)
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/donnafarberlab%2FMMoCHi
Stars: 6
Forks: 1
Open Issues: 0
License: gpl-3.0
Language: Python
Repo Size: 91.2 MB
Dependencies:
350
Created: almost 2 years ago
Updated: 3 months ago
Last pushed: 3 months ago
Last synced: 3 months ago
Topics: annotation, cite-seq, classification, multimodal, scrna-seq, systems-biology
Files
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Readme
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Dependencies
- Babel ==2.12.1
- Brotli ==1.0.9
- Cython ==0.29.35
- Flask ==2.1.1
- Flask-Compress ==1.11
- FlowKit ==0.8.2
- GPy ==1.10.0
- GitPython ==3.1.27
- HeapDict ==1.0.1
- Jinja2 ==3.0.3
- Markdown ==3.3.6
- MarkupSafe ==2.1.1
- PhenoGraph ==1.5.7
- Pillow ==9.1.0
- PyQt5 ==5.15.7
- PyQt5-sip ==12.11.0
- PySocks ==1.7.1
- PyWavelets ==1.3.0
- Pygments ==2.15.1
- QtAwesome ==1.1.1
- QtPy ==2.0.1
- Rtree ==1.0.0
- SECANT ==0.1
- SQLAlchemy ==1.4.34
- SecretStorage ==3.3.1
- Send2Trash ==1.8.0
- Unidecode ==1.3.4
- Werkzeug ==2.1.1
- absl-py ==1.0.0
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- aiohttp ==3.8.1
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- anytree ==2.8.0
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- argh ==0.26.2
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- multimethod ==1.9.1
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- muon ==0.1.2
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- python-language-server ==0.36.2
- pytz ==2022.1
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- rdata ==0.8
- regex ==2022.3.15
- requests ==2.31.0
- requests-oauthlib ==1.3.1
- requests-toolbelt ==0.9.1
- rfc3339-validator ==0.1.4
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- rich ==12.2.0
- rope ==0.23.0
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- scikit-datasets ==0.2.2
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- scikit-learn-intelex ==2023.1.1
- scikit-misc ==0.1.4
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- six ==1.16.0
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- snowballstemmer ==2.2.0
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- soupsieve ==2.3.1
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- sphinx_autodoc_typehints ==1.21.8
- sphinxcontrib-applehelp ==1.0.2
- sphinxcontrib-devhelp ==1.0.2
- sphinxcontrib-htmlhelp ==2.0.0
- sphinxcontrib-jquery ==4.1
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- sphinxcontrib-qthelp ==1.0.3
- sphinxcontrib-serializinghtml ==1.1.5
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- stack-data ==0.2.0
- statsmodels ==0.14.0
- stdlib-list ==0.8.0
- sympy ==1.12
- tables ==3.7.0
- tabulate ==0.8.9
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- tinycss2 ==1.2.1
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- tomlkit ==0.10.1
- toolz ==0.11.2
- torch ==1.11.0
- torchmetrics ==0.7.3
- tornado ==6.3.2
- tqdm ==4.64.0
- traitlets ==5.9.0
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- typing_extensions ==4.3.0
- tzdata ==2023.3
- ujson ==5.1.0
- umap-learn ==0.5.3
- unicodedata2 ==15.0.0
- urllib3 ==1.26.9
- watchdog ==2.1.7
- wcwidth ==0.2.5
- webencodings ==0.5.1
- websocket-client ==1.3.2
- wheel ==0.37.1
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- xarray ==2022.11.0
- yarl ==1.7.2
- zict ==2.1.0
- zipp ==3.8.0
- zope.interface ==5.4.0
requirements.txt
pypi
- anndata >=0.8.0
- imbalanced-learn >=0.11.0
- ipykernel >=6.18.0
- ipython >=8.4.0
- ipywidgets >=7.7.0
- matplotlib >=3.5.1
- numpy >=1.21.0
- pandas >=1.0.5
- pydot >=1.4.2
- scanpy >=1.7.2
- scikit-fda >=0.5
- scikit-learn >=1.1.2
- scipy >=1.8.0
- seaborn >=0.11.2
- tqdm >=4.64.0
- treelib >=1.6.1
setup.py
pypi
- anndata >=0.8.0
- imbalanced-learn >=0.11.0
- ipython >=8.4.0
- ipywidgets >=7.7.0
- leidenalg >=0.8.9
- matplotlib >=3.5.1
- numpy >=1.21.0
- pandas >=1.0.5
- pydot >=1.4.2
- scanpy >=1.7.2
- scikit-learn >=1.1.2
- scipy >=1.8.0
- tqdm >=4.64.0
- treelib >=1.6.1