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GitHub / ebi-gene-expression-group / hca-cdm
Metadata converter for HCA sequencing datasets to the atlas common data format (very similar to the usi format).
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ebi-gene-expression-group%2Fhca-cdm
Stars: 0
Forks: 0
Open Issues: 7
License: mit
Language: Python
Repo Size: 385 KB
Dependencies:
58
Created: over 4 years ago
Updated: about 4 years ago
Last pushed: over 1 year ago
Last synced: about 1 month ago
Files
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Readme
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Dependencies
requirements.txt
pypi
- Jinja2 ==2.10.1
- MarkupSafe ==1.1.1
- PyJWT ==1.7.1
- PyYAML ==5.1.2
- XlsxWriter ==1.2.1
- argcomplete ==1.10.0
- asn1crypto ==0.24.0
- atomicwrites ==1.3.0
- awscli ==1.16.250
- boto3 ==1.9.240
- botocore ==1.12.240
- cachetools ==3.1.1
- certifi ==2019.9.11
- cffi ==1.12.3
- chardet ==3.0.4
- colorama ==0.3.9
- commonmark ==0.9.0
- coverage ==4.5.4
- crc32c ==1.7
- cryptography ==2.3.1
- dcplib ==2.1.2
- decorator ==4.4.0
- docutils ==0.15.2
- et-xmlfile ==1.0.1
- future ==0.17.1
- google-auth ==1.6.3
- google-auth-oauthlib ==0.4.0
- hca ==6.4.0
- hca-ingest ==0.6.8
- idna ==2.8
- jdcal ==1.4.1
- jmespath ==0.9.4
- jsonpointer ==1.14
- jsonref ==0.2
- jsonschema ==2.6.0
- networkx ==2.3
- oauthlib ==3.1.0
- openpyxl ==3.0.0
- polling ==0.3.1
- puremagic ==1.4
- pyOpenSSL ==19.0.0
- pyasn1 ==0.4.7
- pyasn1-modules ==0.2.6
- pycparser ==2.19
- python-dateutil ==2.8.0
- requests ==2.22.0
- requests-oauthlib ==1.2.0
- rsa ==3.4.2
- s3transfer ==0.2.1
- six ==1.12.0
- tenacity ==5.0.4
- tweak ==1.0.3
- urllib3 ==1.25.6