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GitHub / esteinig / cerebro
Metagenomic diagnostics stack for low abundance sample types and clinical reporting
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/esteinig%2Fcerebro
Stars: 0
Forks: 0
Open Issues: 11
License: gpl-3.0
Language: Rust
Repo Size: 1.7 MB
Dependencies:
479
Created: 10 months ago
Updated: 3 months ago
Last pushed: 29 days ago
Last synced: 29 days ago
Topics: aneuploidy, brain, central-nervous-system, diagnostics, illumina, metagenomics, production, public-health
Files
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Readme
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Dependencies
.github/workflows/release.yml
actions
- actions/checkout v3 composite
- oknozor/cocogitto-action v3 composite
- softprops/action-gh-release v1 composite
Cargo.toml
cargo
- assert_cmd 2.0.1 development
- float_eq 0.6.1 development
- predicates 1 development
- tempfile 3.5 development
- actix-cors 0.6
- actix-governor 0.4.0
- actix-web 4
- actix-web-httpauth 0.8.0
- ansi_term 0.12
- anstyle 1.0.1
- anyhow 1.0
- argon2 0.5.0
- base64 0.21.2
- bcrypt 0.15.0
- chrono 0.4
- clap 4.3.23
- colored 2.0
- crossterm 0.23.0
- csv 1.2
- dirs 5.0.1
- env_logger 0.9.0
- fancy-regex 0.11.0
- futures 0.3.0
- git2 0.18.1
- globwalk 0.8.1
- governor 0.5.1
- handlebars 4.3.7
- indicatif 0.16.2
- itertools 0.10.3
- jsonwebtoken 8.3.0
- lettre 0.10.4
- log 0.4
- memchr 2.6.2
- mongodb 2.4.0
- needletail 0.4.1
- niffler 2.3
- notify 6.1.1
- rand 0.8.5
- rand_core 0.6.4
- rayon 1.7
- rcgen 0.11.1
- redis 0.23.0
- regex 1
- reqwest 0.11.16
- rpassword 7.2.0
- rsa 0.9.2
- rust-embed 6.8.1
- rust-htslib 0.38
- serde 1.0
- serde_json 1.0
- statistical 1.0.0
- tabled 0.9.0
- taxonomy 0.10.0
- tectonic 0.14.1
- thiserror 1.0
- thousands 0.2.0
- tokio 1.28.2
- toml 0.7.6
- uuid 1.2.1
- wax 0.5.0
.github/workflows/build.yml
actions
- actions/checkout v3 composite
- houseabsolute/actions-rust-cross v0 composite
- softprops/action-gh-release v1 composite
app/package.json
npm
- @carbon/charts-svelte ^1.12.0 development
- @floating-ui/dom 1.5.1 development
- @skeletonlabs/skeleton ^2.2.0 development
- @skeletonlabs/tw-plugin ^0.2.1 development
- @sveltejs/adapter-auto ^2.0.0 development
- @sveltejs/adapter-node ^1.3.1 development
- @sveltejs/kit ^1.20.4 development
- @tailwindcss/forms 0.5.5 development
- @tailwindcss/typography 0.5.9 development
- @types/node 20.5.6 development
- @typescript-eslint/eslint-plugin ^5.45.0 development
- @typescript-eslint/parser ^5.45.0 development
- autoprefixer 10.4.15 development
- d3 ^7.8.5 development
- d3-cloud ^1.2.7 development
- d3-sankey ^0.12.3 development
- dotenv ^16.3.1 development
- eslint ^8.28.0 development
- eslint-config-prettier ^8.5.0 development
- eslint-plugin-svelte ^2.30.0 development
- highlight.js 11.8.0 development
- postcss 8.4.28 development
- prettier ^2.8.0 development
- prettier-plugin-svelte ^2.10.1 development
- simple-statistics ^7.8.3 development
- svelte ^4.0.5 development
- svelte-check ^3.4.3 development
- tailwindcss 3.3.3 development
- tslib ^2.4.1 development
- typescript ^5.0.0 development
- vite ^4.4.2 development
- vite-plugin-tailwind-purgecss 0.1.3 development