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GitHub / ewels / nf-core-tools
See the main fork of this repository here >>>
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ewels%2Fnf-core-tools
Fork of nf-core/tools
Stars: 1
Forks: 0
Open Issues: 0
License: mit
Language: Python
Repo Size: 15.6 MB
Dependencies:
82
Created: about 6 years ago
Updated: 11 days ago
Last pushed: 3 days ago
Last synced: 1 day ago
Files
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Readme
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Dependencies
.github/workflows/branch.yml
actions
- mshick/add-pr-comment v1 composite
- actions/checkout v3 composite
- actions/setup-node v3 composite
- actions/setup-python v4 composite
- actions/upload-artifact v3 composite
- nf-core/setup-nextflow v1 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- actions/upload-artifact v3 composite
- nf-core/setup-nextflow v1 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- pypa/gh-action-pypi-publish release/v1 composite
- actions/checkout v3 composite
- actions/setup-node v3 composite
- actions/setup-python v4 composite
- isort/isort-action v1.0.0 composite
- psf/black stable composite
.github/workflows/lint-code.yml
actions
- actions/checkout v3 composite
- actions/setup-node v3 composite
- actions/setup-python v4 composite
- isort/isort-action v1.1.0 composite
- mshick/add-pr-comment v1 composite
- psf/black stable composite
- actions/checkout v3 composite
- actions/checkout v3 composite
- actions/checkout v3 composite
- actions/setup-python v3 composite
- codecov/codecov-action v1 composite
- nf-core/setup-nextflow v1 composite
.github/workflows/pytest.yml
actions
- actions/checkout v3 composite
- actions/setup-python v4 composite
- codecov/codecov-action v1 composite
- nf-core/setup-nextflow v1 composite
.github/workflows/rich-codex.yml
actions
- actions/checkout v3 composite
- actions/setup-python v4 composite
- ewels/rich-codex v1 composite
- nf-core/setup-nextflow v1 composite
.github/workflows/sync.yml
actions
- actions/checkout v3 composite
- actions/setup-python v4 composite
- actions/upload-artifact v3 composite
- nf-core/setup-nextflow v1 composite
- SamKirkland/FTP-Deploy-Action 4.0.0 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- SamKirkland/FTP-Deploy-Action 4.0.0 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
Dockerfile
docker
- python 3.8.9-slim build
- Sphinx >=3.3.1
- myst-parser *
- sphinx_rtd_theme >=0.5.0
- sphinxcontrib-napoleon *
requirements-dev.txt
pypi
- Sphinx * development
- black * development
- isort * development
- myst_parser * development
- pytest-cov * development
- pytest-datafiles * development
- requests-mock * development
- requests_mock * development
- sphinx-rtd-theme * development
requirements.txt
pypi
- GitPython *
- click *
- filetype *
- galaxy-tool-util *
- jinja2 *
- jsonschema >=3.0
- markdown >=3.3
- packaging *
- pre-commit *
- prompt_toolkit >=3.0.3
- pytest >=7.0.0
- pytest-workflow >=1.6.0
- pyyaml *
- questionary >=1.8.0
- refgenie *
- requests *
- requests_cache *
- rich >=10.7.0
- rich-click >=1.0.0
- tabulate *