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GitHub / forestdussault / run_metaphlan2
Simple wrapper for quickly running MetaPhlAn2+GraPhlan+HUMAnN2
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/forestdussault%2Frun_metaphlan2
Stars: 2
Forks: 0
Open Issues: 0
License: None
Language: Python
Repo Size: 15.6 KB
Dependencies:
14
Created: about 6 years ago
Updated: over 3 years ago
Last pushed: about 6 years ago
Last synced: about 1 year ago
Files
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Readme
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Dependencies
requirements.txt
pypi
- backports.functools-lru-cache ==1.5
- biopython ==1.70
- cycler ==0.10.0
- humann2 ==0.11.1
- kiwisolver ==1.0.1
- matplotlib ==2.2.0
- numpy ==1.14.2
- pandas ==0.22.0
- pyparsing ==2.2.0
- python-dateutil ==2.7.0
- pytz ==2018.3
- scipy ==1.0.0
- six ==1.11.0
- subprocess32 ==3.2.7