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GitHub / gacatag / IntEREst
IntEREst: Intron Exon Retention Estimator
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gacatag%2FIntEREst
Stars: 2
Forks: 5
Open Issues: 4
License: None
Language: R
Repo Size: 2.83 MB
Dependencies:
28
Created: over 7 years ago
Updated: 7 months ago
Last pushed: 7 months ago
Last synced: 7 months ago
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Dependencies
DESCRIPTION
cran
- GenomicRanges * depends
- R >= 3.5.0 depends
- Rsamtools * depends
- S4Vectors * depends
- SummarizedExperiment * depends
- edgeR * depends
- BiocGenerics * imports
- BiocParallel * imports
- Biostrings * imports
- DBI * imports
- DESeq2 * imports
- DEXSeq * imports
- GenomicAlignments * imports
- GenomicFeatures >= 1.39.4 imports
- IRanges * imports
- RMySQL * imports
- grDevices * imports
- graphics * imports
- grid * imports
- methods * imports
- seqLogo * imports
- seqinr * imports
- stats * imports
- utils * imports
- BSgenome.Hsapiens.UCSC.hg19 * suggests
- clinfun * suggests
- knitr * suggests
- rmarkdown * suggests