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GitHub / gdauria / nf-mtg-engine
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gdauria%2Fnf-mtg-engine
Stars: 1
Forks: 1
Open Issues: 0
License: None
Language: Nextflow
Repo Size: 115 KB
Dependencies:
69
Created: about 3 years ago
Updated: almost 1 year ago
Last pushed: almost 3 years ago
Last synced: 3 months ago
Files
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Readme
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Dependencies
envs/environment.yml
conda
- _libgcc_mutex 0.1
- _openmp_mutex 4.5
- _sysroot_linux-64_curr_repodata_hack 3
- bwa 0.7.17
- bzip2 1.0.8
- c-ares 1.17.1
- ca-certificates 2020.12.5
- certifi 2020.12.5
- cycler 0.10.0
- fastp 0.20.1
- freetype 2.10.4
- htseq 0.13.5
- htslib 1.12
- jpeg 9d
- kernel-headers_linux-64 3.10.0
- kiwisolver 1.3.1
- krb5 1.17.2
- lcms2 2.12
- ld_impl_linux-64 2.35.1
- libblas 3.9.0
- libcblas 3.9.0
- libcurl 7.76.1
- libdeflate 1.7
- libedit 3.1.20191231
- libev 4.33
- libffi 3.3
- libgcc-ng 9.3.0
- libgfortran-ng 9.3.0
- libgfortran5 9.3.0
- libgomp 9.3.0
- liblapack 3.9.0
- libnghttp2 1.43.0
- libopenblas 0.3.12
- libpng 1.6.37
- libssh2 1.9.0
- libstdcxx-ng 9.3.0
- libtiff 4.2.0
- libwebp-base 1.2.0
- llvm-meta 7.0.0
- lz4-c 1.9.3
- matplotlib-base 3.4.1
- ncurses 6.2
- numpy 1.20.2
- olefile 0.46
- openjpeg 2.4.0
- openmp 7.0.0
- openssl 1.1.1k
- perl 5.32.0
- pillow 8.1.2
- pip 21.0.1
- pyparsing 2.4.7
- pysam 0.16.0.1
- python 3.9.2
- python-dateutil 2.8.1
- python_abi 3.9
- readline 8.0
- samtools 1.12
- setuptools 49.6.0
- six 1.15.0
- spades 3.15.2
- sqlite 3.35.3
- sysroot_linux-64 2.17
- tk 8.6.10
- tornado 6.1
- tzdata 2021a
- wheel 0.36.2
- xz 5.2.5
- zlib 1.2.11
- zstd 1.4.9