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GitHub / hemberg-lab / SC3
A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hemberg-lab%2FSC3
Stars: 116
Forks: 55
Open issues: 19
License: gpl-3.0
Language: R
Size: 13.5 MB
Dependencies parsed at:
27
Created at: over 8 years ago
Updated at: 20 days ago
Pushed at: almost 3 years ago
Last synced at: 2 days ago
Topics: bioconductor-package, human-cell-atlas, single-cell-rna-seq
Files
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Readme
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Dependencies
DESCRIPTION
cran
- R >= 3.3 depends
- BiocGenerics * imports
- ROCR * imports
- Rcpp >= 0.11.1 imports
- S4Vectors * imports
- SingleCellExperiment * imports
- SummarizedExperiment * imports
- WriteXLS * imports
- cluster * imports
- doParallel * imports
- doRNG * imports
- e1071 * imports
- foreach * imports
- ggplot2 * imports
- graphics * imports
- methods * imports
- parallel * imports
- pheatmap >= 1.0.8 imports
- robustbase * imports
- rrcov * imports
- shiny * imports
- stats * imports
- utils * imports
- knitr * suggests
- mclust * suggests
- rmarkdown * suggests
- scater * suggests