Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub / jxLiu-bio / SpaGFT

Spatial omics representation

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jxLiu-bio%2FSpaGFT

Stars: 3
Forks: 3
Open Issues: 0

License: mit
Language: Jupyter Notebook
Repo Size: 434 MB
Dependencies: 37

Created: about 2 years ago
Updated: 10 months ago
Last pushed: 3 months ago
Last synced: 4 days ago

Files

Loading...

Readme

Loading...

Dependencies

requirements.txt pypi

gseapy ==0.10.8
kneed ==0.7.0
louvain ==0.7.1
matplotlib ==3.5.2
networkx ==2.8
numba ==0.55.1
numpy ==1.21.5
pandas ==1.4.2
plotnine ==0.8.0
scanpy ==1.9.1
scikit-learn ==1.0.2
scipy ==1.8.0

source/requirements.txt pypi

jinja2 <3.1
myst-parser ==0.15.2
nbsphinx ==0.8.7
sphinx ==3.2.1
sphinx_rtd_theme ==0.5.2

setup.py pypi

Note *
chardet ==5.1.0
charset-normalizer ==3.1.0
configured *
gseapy ==0.10.8
igraph ==0.9.10
kneed ==0.7.0
leidenalg ==0.8.10
louvain ==0.7.1
matplotlib ==3.5.2
networkx ==2.8
numba ==0.55.1
numpy ==1.21.5
pandas ==1.4.2
plotnine ==0.8.0
scanpy ==1.9.1
scikit-learn ==1.0.2
scipy ==1.8.0

source/environment.yml conda

python 3.7.*
theano