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GitHub / kevinmenear / mimic-iv-etl

A streamlined, flexible ETL pipeline tool designed for efficient processing and analysis of MIMIC-IV healthcare data.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kevinmenear%2Fmimic-iv-etl

Stars: 0
Forks: 0
Open Issues: 0

License: mit
Language: Jupyter Notebook
Repo Size: 38.8 MB
Dependencies: 271

Created: 2 months ago
Updated: about 2 months ago
Last pushed: about 2 months ago
Last synced: about 2 months ago

Files

Readme

Dependencies

pyproject.toml pypi

environment.yml conda

_libgcc_mutex 0.1
_openmp_mutex 4.5
_py-xgboost-mutex 2.0
anyio 4.3.0
argon2-cffi 23.1.0
argon2-cffi-bindings 21.2.0
arrow 1.3.0
asttokens 2.4.1
async-lru 2.0.4
attrs 23.2.0
aws-c-auth 0.7.16
aws-c-cal 0.6.10
aws-c-common 0.9.14
aws-c-compression 0.2.18
aws-c-event-stream 0.4.2
aws-c-http 0.8.1
aws-c-io 0.14.6
aws-c-mqtt 0.10.3
aws-c-s3 0.5.2
aws-c-sdkutils 0.1.15
aws-checksums 0.1.18
aws-crt-cpp 0.26.3
aws-sdk-cpp 1.11.267
babel 2.14.0
beautifulsoup4 4.12.3
bleach 6.1.0
brotli 1.1.0
brotli-bin 1.1.0
brotli-python 1.1.0
bzip2 1.0.8
c-ares 1.27.0
ca-certificates 2024.2.2
cached-property 1.5.2
cached_property 1.5.2
certifi 2024.2.2
cffi 1.16.0
charset-normalizer 3.3.2
comm 0.2.2
contourpy 1.2.0
cycler 0.12.1
cyrus-sasl 2.1.28
dbus 1.13.18
debugpy 1.8.1
decorator 5.1.1
defusedxml 0.7.1
entrypoints 0.4
exceptiongroup 1.2.0
executing 2.0.1
expat 2.6.2
fontconfig 2.14.2
fonttools 4.50.0
fqdn 1.5.1
freetype 2.12.1
gflags 2.2.2
glib 2.80.0
glib-tools 2.80.0
glog 0.7.0
gst-plugins-base 1.14.1
gstreamer 1.14.1
h11 0.14.0
h2 4.1.0
hpack 4.0.0
httpcore 1.0.4
httpx 0.27.0
hyperframe 6.0.1
icu 73.2
idna 3.6
importlib-metadata 7.0.2
importlib_metadata 7.0.2
importlib_resources 6.3.2
ipykernel 6.29.3
ipython 8.22.2
ipywidgets 8.1.2
isoduration 20.11.0
jedi 0.19.1
jinja2 3.1.3
joblib 1.3.2
jpeg 9e
json5 0.9.24
jsonpointer 2.4
jsonschema 4.21.1
jsonschema-specifications 2023.12.1
jsonschema-with-format-nongpl 4.21.1
jupyter-lsp 2.2.4
jupyter_client 8.6.1
jupyter_core 5.7.2
jupyter_events 0.10.0
jupyter_server 2.13.0
jupyter_server_terminals 0.5.3
jupyterlab 4.1.5
jupyterlab_pygments 0.3.0
jupyterlab_server 2.25.4
jupyterlab_widgets 3.0.10
keyutils 1.6.1
kiwisolver 1.4.5
krb5 1.20.1
lcms2 2.12
ld_impl_linux-64 2.40
lerc 3.0
libabseil 20240116.1
libarrow 15.0.2
libarrow-acero 15.0.2
libarrow-dataset 15.0.2
libarrow-flight 15.0.2
libarrow-flight-sql 15.0.2
libarrow-gandiva 15.0.2
libarrow-substrait 15.0.2
libblas 3.9.0
libbrotlicommon 1.1.0
libbrotlidec 1.1.0
libbrotlienc 1.1.0
libcblas 3.9.0
libclang 14.0.6
libclang13 14.0.6
libcrc32c 1.1.2
libcups 2.3.3
libcurl 8.5.0
libdeflate 1.17
libedit 3.1.20230828
libev 4.33
libevent 2.1.12
libexpat 2.6.2
libffi 3.4.2
libgcc-ng 13.2.0
libgfortran-ng 13.2.0
libgfortran5 13.2.0
libglib 2.80.0
libgomp 13.2.0
libgoogle-cloud 2.22.0
libgoogle-cloud-storage 2.22.0
libgrpc 1.62.1
libiconv 1.17
liblapack 3.9.0
libllvm14 14.0.6
libllvm16 16.0.6
libnghttp2 1.58.0
libnl 3.9.0
libnsl 2.0.1
libopenblas 0.3.26
libparquet 15.0.2
libpng 1.6.43
libpq 12.17
libprotobuf 4.25.3
libre2-11 2023.09.01
libsodium 1.0.18
libsqlite 3.45.2
libssh2 1.11.0
libstdcxx-ng 13.2.0
libthrift 0.19.0
libtiff 4.5.1
libutf8proc 2.8.0
libuuid 2.38.1
libwebp-base 1.3.2
libxcb 1.15
libxcrypt 4.4.36
libxgboost 2.0.3
libxkbcommon 1.6.0
libxml2 2.12.6
libzlib 1.2.13
lz4-c 1.9.4
markupsafe 2.1.5
matplotlib 3.8.3
matplotlib-base 3.8.3
matplotlib-inline 0.1.6
mistune 3.0.2
munkres 1.1.4
mysql 5.7.24
nbclient 0.10.0
nbconvert-core 7.16.2
nbformat 5.10.3
ncurses 6.4.20240210
nest-asyncio 1.6.0
notebook-shim 0.2.4
numpy 1.26.4
openjpeg 2.4.0
openssl 3.2.1
orc 2.0.0
overrides 7.7.0
packaging 24.0
pandas 2.2.1
parso 0.8.3
patsy 0.5.6
pcre2 10.43
pexpect 4.9.0
pickleshare 0.7.5
pillow 10.2.0
pip 24.0
pkgutil-resolve-name 1.3.10
platformdirs 4.2.0
ply 3.11
prometheus_client 0.20.0
psutil 5.9.8
pthread-stubs 0.4
ptyprocess 0.7.0
pure_eval 0.2.2
py-xgboost 2.0.3
py4j 0.10.9.7
pyarrow 15.0.2
pycparser 2.21
pygments 2.17.2
pyparsing 3.1.2
pyqt 5.15.10
pyqt5-sip 12.13.0
pysocks 1.7.1
pyspark 3.5.1
python 3.12.2
python-fastjsonschema 2.19.1
python-json-logger 2.0.7
python-tzdata 2024.1
python_abi 3.12
pytz 2024.1
pyyaml 6.0.1
pyzmq 25.1.2
qt-main 5.15.2
rdma-core 50.0
re2 2023.09.01
readline 8.2
referencing 0.34.0
requests 2.31.0
rfc3339-validator 0.1.4
rfc3986-validator 0.1.1
rpds-py 0.18.0
s2n 1.4.7
scikit-learn 1.4.1.post1
scipy 1.12.0
seaborn 0.13.2
seaborn-base 0.13.2
send2trash 1.8.2
setuptools 69.2.0
sip 6.7.12
six 1.16.0
snappy 1.1.10
sniffio 1.3.1
soupsieve 2.5
sqlite 3.45.2
statsmodels 0.14.1
terminado 0.18.1
threadpoolctl 3.4.0
tinycss2 1.2.1
tk 8.6.13
tomli 2.0.1
tornado 6.4
traitlets 5.14.2
types-python-dateutil 2.9.0.20240316
typing-extensions 4.10.0
typing_extensions 4.10.0
typing_utils 0.1.0
tzdata 2024a
ucx 1.15.0
uri-template 1.3.0
urllib3 2.2.1
wcwidth 0.2.13
webcolors 1.13
webencodings 0.5.1
websocket-client 1.7.0
wheel 0.42.0
widgetsnbextension 4.0.10
xgboost 2.0.3
xkeyboard-config 2.41
xorg-kbproto 1.0.7
xorg-libx11 1.8.7
xorg-libxau 1.0.11
xorg-libxdmcp 1.1.3
xorg-xextproto 7.3.0
xorg-xproto 7.0.31
xz 5.4.6
yaml 0.2.5
zeromq 4.3.5
zipp 3.17.0
zlib 1.2.13
zstd 1.5.5