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GitHub / lilab-bcb / pegasus
A tool for analyzing trascriptomes of millions of single cells.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lilab-bcb%2Fpegasus
Stars: 72
Forks: 20
Open Issues: 10
License: bsd-3-clause
Language: Python
Repo Size: 735 MB
Dependencies:
55
Created: over 4 years ago
Updated: 3 days ago
Last pushed: 5 days ago
Last synced: 5 days ago
Commit Stats
Commits: 1217
Authors: 21
Mean commits per author: 57.95
Development Distribution Score: 0.612
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/lilab-bcb/pegasus
Files
Dependencies
- anndata *
- demuxEM *
- docutils <=0.16
- forceatlas2-python *
- importlib_metadata *
- joblib *
- matplotlib >=2.0.0
- natsort *
- numba *
- pandas >=0.21
- pegasusio >=0.5.1
- psutil *
- pyarrow *
- scikit-learn *
- scikit-misc *
- scipy *
- seaborn *
- sphinx >=2.0.1
- sphinx-autodoc-typehints *
- sphinx_rtd_theme >=0.3.1
- statsmodels *
- umap-learn *
- Cython *
- adjustText *
- anndata >=0.7.1
- demuxEM *
- docopt *
- hnswlib *
- importlib_metadata >=0.7
- joblib >=0.14
- leidenalg *
- lightgbm >=2.2.1
- loompy *
- matplotlib >=2.0.0
- natsort *
- numba *
- numpy *
- pandas >=1.2.0
- pegasusio >=0.5.1
- psutil *
- pybind11 *
- python-igraph *
- scikit-learn >=0.23.2
- scikit-misc *
- scipy *
- seaborn *
- setuptools *
- statsmodels *
- threadpoolctl *
- umap-learn >=0.5.2
- wordcloud *
- xlsxwriter *
- actions/checkout v2 composite
- actions/setup-python v2 composite