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GitHub / luciat-92 / Multiomic_VAE

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/luciat-92%2FMultiomic_VAE

Stars: 0
Forks: 0
Open Issues: 0

License: None
Language: Jupyter Notebook
Repo Size: 23.9 MB
Dependencies: 347

Created: 6 months ago
Updated: 5 months ago
Last pushed: 3 months ago
Last synced: about 1 month ago

Files

Readme

Dependencies

environment.yml conda

_libgcc_mutex 0.1
_openmp_mutex 4.5
alsa-lib 1.2.10
anyio 4.0.0
aom 3.7.1
argon2-cffi 23.1.0
argon2-cffi-bindings 21.2.0
arrow 1.3.0
asttokens 2.4.1
async-lru 2.0.4
attr 2.5.1
attrs 23.1.0
babel 2.13.1
backports 1.0
backports.functools_lru_cache 1.6.5
beautifulsoup4 4.12.2
blas 2.16
bleach 6.1.0
blosc 1.21.5
bokeh 3.3.1
brotli 1.1.0
brotli-bin 1.1.0
brotli-python 1.1.0
brunsli 0.1
bzip2 1.0.8
c-blosc2 2.11.2
ca-certificates 2023.11.17
cached-property 1.5.2
cached_property 1.5.2
cairo 1.18.0
certifi 2023.11.17
cffi 1.16.0
charls 2.4.2
charset-normalizer 3.3.2
click 8.1.7
cloudpickle 3.0.0
colorama 0.4.6
colorcet 3.0.1
comm 0.1.4
contourpy 1.2.0
cuda-cudart 11.7.99
cuda-cupti 11.7.101
cuda-libraries 11.7.1
cuda-nvrtc 11.7.99
cuda-nvtx 11.7.91
cuda-runtime 11.7.1
cycler 0.12.1
cytoolz 0.12.2
dask-core 2023.11.0
datashader 0.16.0
dav1d 1.2.1
dbus 1.13.6
debugpy 1.8.0
decorator 5.1.1
defusedxml 0.7.1
entrypoints 0.4
exceptiongroup 1.1.3
executing 2.0.1
expat 2.5.0
filelock 3.13.1
font-ttf-dejavu-sans-mono 2.37
font-ttf-inconsolata 3.000
font-ttf-source-code-pro 2.038
font-ttf-ubuntu 0.83
fontconfig 2.14.2
fonts-conda-ecosystem 1
fonts-conda-forge 1
fonttools 4.44.1
fqdn 1.5.1
freetype 2.12.1
fsspec 2023.10.0
gettext 0.21.1
giflib 5.2.1
glib 2.78.1
glib-tools 2.78.1
gmp 6.3.0
gmpy2 2.1.2
graphite2 1.3.13
gst-plugins-base 1.22.7
gstreamer 1.22.7
harfbuzz 8.3.0
holoviews 1.18.1
icu 73.2
idna 3.4
imagecodecs 2023.9.18
imageio 2.31.5
importlib-metadata 6.8.0
importlib-resources 6.1.1
importlib_metadata 6.8.0
importlib_resources 6.1.1
intel-openmp 2023.1.0
ipykernel 6.26.0
ipython 8.17.2
isoduration 20.11.0
jedi 0.19.1
jinja2 3.1.2
joblib 1.3.2
json5 0.9.14
jsonpointer 2.4
jsonschema 4.19.2
jsonschema-specifications 2023.11.1
jsonschema-with-format-nongpl 4.19.2
jupyter-lsp 2.2.0
jupyter_client 8.6.0
jupyter_core 5.5.0
jupyter_events 0.9.0
jupyter_server 2.10.1
jupyter_server_terminals 0.4.4
jupyterlab 4.0.8
jupyterlab_pygments 0.2.2
jupyterlab_server 2.25.1
jxrlib 1.1
kaleido-core 0.2.1
keyutils 1.6.1
kiwisolver 1.4.5
krb5 1.21.2
lame 3.100
lcms2 2.15
ld_impl_linux-64 2.40
lerc 4.0.0
libaec 1.1.2
libavif16 1.0.2
libblas 3.8.0
libbrotlicommon 1.1.0
libbrotlidec 1.1.0
libbrotlienc 1.1.0
libcap 2.69
libcblas 3.8.0
libclang 15.0.7
libclang13 15.0.7
libcublas 11.10.3.66
libcufft 10.7.2.124
libcufile 1.8.0.34
libcups 2.3.3
libcurand 10.3.4.52
libcusolver 11.4.0.1
libcusparse 11.7.4.91
libdeflate 1.19
libedit 3.1.20191231
libevent 2.1.12
libexpat 2.5.0
libffi 3.4.2
libflac 1.4.3
libgcc-ng 13.2.0
libgcrypt 1.10.2
libgfortran-ng 7.5.0
libgfortran4 7.5.0
libglib 2.78.1
libgomp 13.2.0
libgpg-error 1.47
libhwloc 2.9.3
libiconv 1.17
libjpeg-turbo 3.0.0
liblapack 3.8.0
liblapacke 3.8.0
libllvm14 14.0.6
libllvm15 15.0.7
libnpp 11.7.4.75
libnsl 2.0.1
libnvjpeg 11.8.0.2
libogg 1.3.4
libopus 1.3.1
libpng 1.6.39
libpq 16.1
libsndfile 1.2.2
libsodium 1.0.18
libsqlite 3.44.0
libstdcxx-ng 13.2.0
libsystemd0 254
libtiff 4.6.0
libuuid 2.38.1
libvorbis 1.3.7
libwebp-base 1.3.2
libxcb 1.15
libxkbcommon 1.6.0
libxml2 2.11.5
libzlib 1.2.13
libzopfli 1.0.3
linkify-it-py 2.0.0
llvmlite 0.41.1
locket 1.0.0
lz4-c 1.9.4
markdown 3.5.1
markdown-it-py 3.0.0
markupsafe 2.1.3
mathjax 2.7.7
matplotlib 3.8.1
matplotlib-base 3.8.1
matplotlib-inline 0.1.6
mdit-py-plugins 0.4.0
mdurl 0.1.0
mistune 3.0.2
mkl 2020.2
mpc 1.3.1
mpfr 4.2.1
mpg123 1.32.3
mpmath 1.3.0
multipledispatch 0.6.0
munkres 1.0.7
mysql-common 8.0.33
mysql-libs 8.0.33
nbclient 0.8.0
nbconvert-core 7.11.0
nbformat 5.9.2
ncurses 6.4
nest-asyncio 1.5.8
networkx 3.2
notebook 7.0.6
notebook-shim 0.2.3
nspr 4.35
nss 3.94
numba 0.58.1
numpy 1.22.4
openjpeg 2.5.0
openssl 3.2.0
overrides 7.4.0
packaging 23.2
pandas 2.1.3
pandocfilters 1.5.0
panel 1.3.2
param 2.0.1
parso 0.8.3
partd 1.4.1
patsy 0.5.3
pcre2 10.40
pexpect 4.8.0
pickleshare 0.7.5
pillow 10.1.0
pip 23.3.1
pixman 0.42.2
pkgutil-resolve-name 1.3.10
platformdirs 4.0.0
plotly 5.18.0
ply 3.11
prometheus_client 0.18.0
prompt-toolkit 3.0.41
prompt_toolkit 3.0.41
psutil 5.9.5
pthread-stubs 0.4
ptyprocess 0.7.0
pulseaudio-client 16.1
pure_eval 0.2.2
pycparser 2.21
pyct 0.5.0
pygments 2.16.1
pynndescent 0.5.11
pyparsing 3.1.1
pyqt 5.15.9
pyqt5-sip 12.12.2
pysocks 1.7.1
python 3.9.18
python-dateutil 2.8.2
python-fastjsonschema 2.19.0
python-json-logger 2.0.7
python-kaleido 0.2.1
python-tzdata 2023.3
python_abi 3.9
pytorch 2.0.1
pytorch-cuda 11.7
pytorch-mutex 1.0
pytz 2023.3.post1
pyviz_comms 3.0.0
pywavelets 1.4.1
pyyaml 6.0.1
pyzmq 25.1.1
qt-main 5.15.8
rav1e 0.6.6
readline 8.2
referencing 0.31.0
requests 2.31.0
rfc3339-validator 0.1.4
rfc3986-validator 0.1.1
rpds-py 0.12.0
scikit-image 0.19.3
scikit-learn 1.3.2
scipy 1.5.3
seaborn 0.13.0
seaborn-base 0.13.0
send2trash 1.8.2
setuptools 68.2.2
sip 6.7.12
six 1.16.0
snappy 1.1.10
sniffio 1.3.0
soupsieve 2.5
sqlite 3.44.0
stack_data 0.6.2
statsmodels 0.14.0
svt-av1 1.7.0
sympy 1.12
tbb 2021.10.0
tenacity 8.2.3
terminado 0.18.0
threadpoolctl 3.2.0
tifffile 2023.9.26
tinycss2 1.2.1
tk 8.6.13
toml 0.10.2
tomli 2.0.1
toolz 0.12.0
torchtriton 2.0.0
tornado 6.3.3
tqdm 4.66.1
traitlets 5.13.0
types-python-dateutil 2.8.19.14
typing-extensions 4.8.0
typing_extensions 4.8.0
typing_utils 0.1.0
tzdata 2023c
uc-micro-py 1.0.1
umap-learn 0.5.5
unicodedata2 15.1.0
uri-template 1.3.0
urllib3 2.1.0
wcwidth 0.2.10
webcolors 1.13
webencodings 0.5.1
websocket-client 1.6.4
wheel 0.41.3
xarray 2023.7.0
xcb-util 0.4.0
xcb-util-image 0.4.0
xcb-util-keysyms 0.4.0
xcb-util-renderutil 0.3.9
xcb-util-wm 0.4.1
xkeyboard-config 2.40
xorg-kbproto 1.0.7
xorg-libice 1.1.1
xorg-libsm 1.2.4
xorg-libx11 1.8.7
xorg-libxau 1.0.11
xorg-libxdmcp 1.1.3
xorg-libxext 1.3.4
xorg-libxrender 0.9.11
xorg-renderproto 0.11.1
xorg-xextproto 7.3.0
xorg-xf86vidmodeproto 2.3.1
xorg-xproto 7.0.31
xyzservices 2023.10.1
xz 5.2.6
yaml 0.2.5
zeromq 4.3.5
zfp 1.0.0
zipp 3.17.0
zlib 1.2.13
zlib-ng 2.0.7
zstd 1.5.5