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GitHub / menchelab / novarinocollab
A repository containing the code for the collaboration with the Novarino lab
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/menchelab%2Fnovarinocollab
Stars: 0
Forks: 0
Open Issues: 0
License: None
Language: Jupyter Notebook
Repo Size: 177 MB
Dependencies:
26
Created: over 2 years ago
Updated: 6 months ago
Last pushed: 6 months ago
Last synced: 6 months ago
Files
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Readme
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Dependencies
environment.yml
pypi
- adjusttext ==0.7.3
- anndata ==0.7.8
- ipykernel ==6.6.1
- ipython ==7.31.0
- jupyter-client ==7.1.0
- jupyter-core ==4.9.1
- jupyterlab-pygments ==0.1.2
- jupyterlab-widgets ==1.0.2
- matplotlib ==3.5.1
- matplotlib-venn ==0.11.6
- numpy ==1.20.3
- pandas ==1.3.5
- python-levenshtein ==0.12.2
- pytorch-lightning ==1.5.10
- requests ==2.27.1
- scanpy ==1.8.2
- scikit-learn ==1.0.2
- scipy ==1.7.3
- scvi ==0.6.8
- scvi-tools ==0.15.2
- seaborn ==0.11.2
- statsmodels ==0.13.1
- thefuzz ==0.19.0
- torch ==1.11.0
- torchaudio ==0.11.0
- torchvision ==0.12.0