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GitHub / microfetch / microfetch-pipeline

Pipeline for running the microfetch process to pull genomic data from central archives.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/microfetch%2Fmicrofetch-pipeline

Stars: 0
Forks: 0
Open Issues: 2

License: None
Language: Python
Repo Size: 1.25 MB
Dependencies: 32

Created: about 2 years ago
Updated: over 1 year ago
Last pushed: over 1 year ago
Last synced: about 1 year ago

Files

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Dependencies

.github/workflows/test.yml actions

actions/checkout v2 composite
actions/setup-python v2 composite
postgres * docker

app/Dockerfile docker

python 3.10.4-slim@sha256 build

docker-compose.test.yml docker

postgres latest

docker-compose.yml docker

postgres latest

web/Dockerfile docker

python 3.10.4-slim@sha256 build

app/requirements.txt pypi

Django ==4.0.4
Markdown ==3.3.7
django-db-logger ==0.1.12
djangorestframework ==3.13.1
ena_utils ==0.2.1
factory_boy ==3.2.1
faker ==13.11.1
mapbox ==0.18.0
pandas ==1.4.2
psycopg2-binary ==2.9.3
python-digitalocean ==1.17.0
pyyaml ==6.0
requests ==2.27.1
retry ==0.9.2
sqlalchemy ==1.4.36
uritemplate ==4.1.1

web/requirements.test.txt pypi

factory_boy ==3.2.1 test
faker ==13.11.1 test

web/requirements.txt pypi

Django ==4.0.4
Markdown ==3.3.7
django-db-logger ==0.1.12
djangorestframework ==3.13.1
psycopg2-binary ==2.9.3
pyyaml ==6.0
uritemplate ==4.1.1