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GitHub / nadeemlab / ImPartial
Interactive deep learning whole-cell segmentation and thresholding using partial annotations
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/nadeemlab%2FImPartial
Stars: 29
Forks: 3
Open Issues: 2
License: other
Language: Jupyter Notebook
Repo Size: 154 MB
Dependencies:
11
Created: about 3 years ago
Updated: 14 days ago
Last pushed: 2 days ago
Last synced: about 22 hours ago
Topics: cell-biology, cell-segmentation, deep-learning, denoising, instance-segmentation, interactive, pytorch, segmentation
Files
Dependencies
- com.squareup.okhttp3:okhttp 4.9.3
- commons-io:commons-io 2.11.0
- net.imagej:imagej
- net.imglib2:imglib2-ij
- org.json:json 20211205
- projectmonai/monailabel 0.5.1 build
- matplotlib ==3.6.0
- monailabel >=0.6.0rc2
- pandas ==1.5.0
- roifile ==2022.9.19
- scikit-learn ==1.1.2