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GitHub / neherlab / treetime-cloud

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/neherlab%2Ftreetime-cloud

Stars: 6
Forks: 2
Open Issues: 0

License: None
Language: TypeScript
Repo Size: 14.2 MB
Dependencies: 4,140

Created: over 4 years ago
Updated: 11 months ago
Last pushed: almost 3 years ago
Last synced: 29 days ago

Files

Readme

Dependencies

services/worker/pyproject.toml pypi

data-science-types ^0.2.5 develop
flake8 3.7.9 develop
flake8-bugbear 19.8.0 develop
flake8-docstrings 1.5.0 develop
pylint 2.4.4 develop
pytest 5.3.1 develop
pytest-cov 2.8.1 develop
pytest-instafail 0.4.1 develop
pytest-mock 1.13.0 develop
pytest-sugar 0.9.2 develop
pytest-xdist 1.30.0 develop
typing 3.7.4 develop
vulture 1.2 develop
yapf 0.29.0 develop
biopython 1.71
boto3 1.11.13
mypy 0.750
numpy 1.15.1
phylo-treetime 0.5.1
pika 1.1.0
python ^3.6.9
requests ^2.24.0

services/web/package.json npm

@babel/core 7.10.5 development
@babel/node 7.10.5 development
@babel/plugin-proposal-class-properties 7.10.4 development
@babel/plugin-proposal-decorators 7.10.5 development
@babel/plugin-proposal-numeric-separator 7.10.4 development
@babel/plugin-syntax-dynamic-import 7.8.3 development
@babel/plugin-transform-flow-strip-types 7.10.4 development
@babel/plugin-transform-modules-commonjs 7.10.4 development
@babel/plugin-transform-react-constant-elements 7.10.4 development
@babel/plugin-transform-react-inline-elements 7.10.4 development
@babel/plugin-transform-runtime 7.10.5 development
@babel/preset-env 7.10.4 development
@babel/preset-react 7.10.4 development
@babel/register 7.10.5 development
@babel/runtime 7.10.5 development
@babel/runtime-corejs3 7.10.5 development
@next/mdx 9.5.1 development
@nuxt/friendly-errors-webpack-plugin 2.5.0 development
@packtracker/webpack-plugin 2.3.0 development
@primer/css 15.0.0 development
@schemastore/package 0.0.6 development
@svgr/webpack 5.4.0 development
@testing-library/jest-dom 5.11.2 development
@testing-library/react 10.4.7 development
@testing-library/user-event 12.0.17 development
@types/classnames 2.2.10 development
@types/compression-webpack-plugin 4.0.0 development
@types/connect-history-api-fallback 1.3.3 development
@types/express 4.17.7 development
@types/extra-watch-webpack-plugin 1.0.1 development
@types/file-saver 2.0.1 development
@types/friendly-errors-webpack-plugin 0.1.2 development
@types/fs-extra 9.0.1 development
@types/history 4.7.7 development
@types/jest 26.0.7 development
@types/jest-axe 3.5.0 development
@types/js-yaml 3.12.5 development
@types/lodash 4.14.158 development
@types/lodash-webpack-plugin 0.11.4 development
@types/mdx-js__react 1.5.2 development
@types/node 14.0.27 development
@types/react 16.9.43 development
@types/react-dom 16.9.8 development
@types/react-helmet 6.0.0 development
@types/react-no-ssr 1.1.1 development
@types/react-redux 7.1.9 development
@types/react-resize-detector 4.2.0 development
@types/react-router 5.1.8 development
@types/react-router-dom 5.1.5 development
@types/reactstrap 8.5.0 development
@types/redux-logger 3.0.8 development
@types/redux-testkit 1.0.5 development
@types/rimraf 3.0.0 development
@types/semver 7.3.1 development
@types/styled-components 5.1.1 development
@types/uuid 8.0.0 development
@types/webpack 4.41.21 development
@types/webpackbar 4.0.0 development
@typescript-eslint/eslint-plugin 3.7.1 development
@typescript-eslint/parser 3.7.1 development
@typescript-eslint/typescript-estree 3.7.1 development
all-contributors-cli 6.17.0 development
allow-methods 2.0.0 development
babel-jest 26.2.1 development
babel-plugin-lodash 3.3.4 development
babel-plugin-module-resolver 4.0.0 development
babel-plugin-parameter-decorator 1.0.16 development
babel-plugin-redux-saga 1.1.2 development
babel-plugin-smart-webpack-import 1.7.0 development
babel-plugin-strip-function-call 1.0.2 development
babel-plugin-styled-components 1.11.1 development
babel-plugin-transform-react-remove-prop-types 0.4.24 development
babel-plugin-transform-typescript-metadata 0.3.0 development
babel-plugin-typescript-to-proptypes 1.4.0 development
codecov 3.7.2 development
compression-webpack-plugin 4.0.0 development
connect-history-api-fallback 1.6.0 development
cross-env 7.0.2 development
css-loader 3.6.0 development
dotenv 8.2.0 development
eslint 7.5.0 development
eslint-config-airbnb 18.2.0 development
eslint-config-airbnb-base 14.2.0 development
eslint-config-airbnb-typescript 9.0.0 development
eslint-config-prettier 6.11.0 development
eslint-config-react-app 5.2.1 development
eslint-import-resolver-ts 0.4.2 development
eslint-import-resolver-typescript 2.2.0 development
eslint-loader 4.0.2 development
eslint-plugin-array-func 3.1.7 development
eslint-plugin-cflint 1.0.0 development
eslint-plugin-cypress 2.11.1 development
eslint-plugin-flowtype 5.2.0 development
eslint-plugin-i18next 4.3.0 development
eslint-plugin-import 2.22.0 development
eslint-plugin-jest 23.20.0 development
eslint-plugin-jest-dom 3.1.4 development
eslint-plugin-json 2.1.2 development
eslint-plugin-jsx-a11y 6.3.1 development
eslint-plugin-lodash 7.1.0 development
eslint-plugin-no-loops 0.3.0 development
eslint-plugin-no-secrets 0.6.8 development
eslint-plugin-node 11.1.0 development
eslint-plugin-only-ascii 0.0.0 development
eslint-plugin-only-warn 1.0.2 development
eslint-plugin-prettier 3.1.4 development
eslint-plugin-promise 4.2.1 development
eslint-plugin-react 7.20.5 development
eslint-plugin-react-hooks 4.0.8 development
eslint-plugin-react-redux 3.1.0 development
eslint-plugin-redux-saga 1.1.3 development
eslint-plugin-security 1.4.0 development
eslint-plugin-sonarjs 0.5.0 development
eslint-plugin-unicorn 21.0.0 development
express 4.17.1 development
express-static-gzip 2.0.7 development
extra-watch-webpack-plugin 1.0.3 development
file-loader 6.0.0 development
fork-ts-checker-webpack-plugin 5.0.12 development
fs-extra 9.0.1 development
i18next-parser 2.1.3 development
identity-obj-proxy 3.0.0 development
is-interactive 1.0.0 development
jest 26.2.1 development
jest-axe 3.5.0 development
jest-chain 1.1.5 development
jest-extended 0.11.5 development
jest-runner-eslint 0.10.0 development
jest-styled-components 7.0.2 development
jest-transformer-mdx 2.2.0 development
jest-watch-typeahead 0.6.0 development
js-yaml 3.14.0 development
lodash-webpack-plugin 0.11.5 development
map.prototype.tojson 0.1.3 development
neodoc 2.0.2 development
next-transpile-modules 4.0.2 development
nodemon 2.0.4 development
npm-run-all 4.1.5 development
postcss-flexbugs-fixes 4.2.1 development
postcss-loader 3.0.0 development
postcss-preset-env 6.7.0 development
prettier 2.0.5 development
raw-loader 4.0.1 development
react-dropzone 11.0.2 development
redux-devtools-extension 2.13.8 development
redux-immutable-state-invariant 2.1.0 development
redux-testkit 1.0.6 development
remark-images 2.0.0 development
remark-math 2.0.1 development
rimraf 3.0.2 development
sass 1.26.10 development
set.prototype.tojson 0.1.1 development
style-loader 1.2.1 development
stylehacks 4.0.3 development
stylelint 13.6.1 development
stylelint-bare-webpack-plugin 2.0.2 development
stylelint-config-css-modules 2.2.0 development
stylelint-config-prettier 8.0.2 development
stylelint-config-primer 9.0.0 development
stylelint-config-recommended 3.0.0 development
stylelint-config-recommended-scss 4.2.0 development
stylelint-config-standard 20.0.0 development
stylelint-config-styled-components 0.1.1 development
stylelint-declaration-block-no-ignored-properties 2.3.0 development
stylelint-group-selectors 1.0.7 development
stylelint-high-performance-animation 1.5.1 development
stylelint-no-indistinguishable-colors 1.3.0 development
stylelint-order 4.1.0 development
stylelint-prettier 1.1.2 development
stylelint-processor-styled-components 1.10.0 development
stylelint-scss 3.18.0 development
svgo 1.3.2 development
ts-essentials 7.0.0 development
ts-jest 26.1.4 development
ts-node 8.10.2 development
typescript 3.9.7 development
url-loader 4.1.0 development
utility-types 3.10.0 development
webpack 4.44.1 development
webpackbar 4.0.0 development
yaml-loader 0.6.0 development
@mdx-js/loader 1.6.16
@mdx-js/react 1.6.16
@types/react-virtualized-auto-sizer 1.0.0
@types/react-window 1.8.2
animate.css 4.1.0
autoprefixer 9.8.5
axios 0.19.2
bootstrap 4.5.0
classnames 2.2.6
connected-next-router 3.1.0
core-js 3.6.5
countries-list 2.5.6
css.escape 1.5.1
fasy 7.0.1
file-saver 2.0.2
flag-icon-css 3.5.0
history 5.0.0
i18next 19.6.3
immer 7.0.7
immutable 3.8.2
lodash 4.17.19
moment 2.27.0
next 9.4.4
next-compose-plugins 2.2.0
numbro 2.3.1
polished 3.6.5
prop-types 15.7.2
re-reselect 4.0.0
react 16.13.1
react-awesome-popover 6.1.1
react-dom 16.13.1
react-error-boundary 2.3.1
react-file-icon 1.0.0
react-helmet 6.1.0
react-i18next 11.7.0
react-icons 3.10.0
react-redux 7.2.1
reactstrap 8.5.1
redux 4.0.5
redux-logger 3.0.6
redux-persist 6.0.0
redux-saga 1.1.3
redux-saga-test-plan 4.0.0-rc.3
redux-thunk 2.3.0
reflect-metadata 0.1.13
regenerator-runtime 0.13.7
reselect 4.0.0
semver 7.3.2
serialize-javascript 4.0.0
snyk ^1.369.2
styled-components 5.1.1
typeface-open-sans 0.0.75
typescript-fsa 3.0.0
typescript-fsa-reducers 1.2.2
uuid 8.3.0

services/worker/package.json npm

nodemon 2.0.2 development

services/api/package.json npm

@babel/code-frame 7.10.4 development
@babel/core 7.11.0 development
@babel/node 7.10.5 development
@babel/plugin-proposal-class-properties 7.10.4 development
@babel/plugin-proposal-decorators 7.10.5 development
@babel/plugin-proposal-numeric-separator 7.10.4 development
@babel/preset-env 7.11.0 development
@babel/preset-typescript 7.10.4 development
@nestjs/cli 7.4.1 development
@nestjs/schematics 7.0.1 development
@nestjs/testing 7.4.2 development
@nuxt/friendly-errors-webpack-plugin 2.5.0 development
@schemastore/package 0.0.6 development
@types/babel__code-frame 7.0.1 development
@types/body-parser 1.19.0 development
@types/express 4.17.7 development
@types/extra-watch-webpack-plugin 1.0.1 development
@types/friendly-errors-webpack-plugin 0.1.2 development
@types/fs-extra 9.0.1 development
@types/jest 26.0.8 development
@types/lodash 4.14.158 development
@types/logform 1.10.1 development
@types/multer 1.4.3 development
@types/node 14.0.27 development
@types/serialize-javascript 4.0.0 development
@types/set-cookie-parser 0.0.6 development
@types/start-server-webpack-plugin 2.2.0 development
@types/supertest 2.0.10 development
@types/terser-webpack-plugin 3.0.0 development
@types/uuid 8.0.0 development
@types/webpack 4.41.21 development
@types/webpack-node-externals 2.5.0 development
@types/webpackbar 4.0.0 development
@typescript-eslint/eslint-plugin 3.7.1 development
@typescript-eslint/parser 3.7.1 development
@typescript-eslint/typescript-estree 3.7.1 development
babel-eslint 10.1.0 development
babel-jest 26.2.2 development
babel-loader 8.1.0 development
babel-plugin-lodash 3.3.4 development
babel-plugin-parameter-decorator 1.0.16 development
babel-plugin-transform-typescript-metadata 0.3.0 development
browserslist 4.13.0 development
caniuse-lite 1.0.30001109 development
chalk 4.1.0 development
eslint 7.5.0 development
eslint-config-airbnb-base 14.2.0 development
eslint-config-prettier 6.11.0 development
eslint-loader 4.0.2 development
eslint-plugin-array-func 3.1.7 development
eslint-plugin-cflint 1.0.0 development
eslint-plugin-import 2.22.0 development
eslint-plugin-jest 23.20.0 development
eslint-plugin-json 2.1.2 development
eslint-plugin-lodash 7.1.0 development
eslint-plugin-no-loops 0.3.0 development
eslint-plugin-no-secrets 0.6.8 development
eslint-plugin-node 11.1.0 development
eslint-plugin-only-ascii 0.0.0 development
eslint-plugin-only-warn 1.0.2 development
eslint-plugin-prettier 3.1.4 development
eslint-plugin-promise 4.2.1 development
eslint-plugin-security 1.4.0 development
eslint-plugin-sonarjs 0.5.0 development
eslint-plugin-unicorn 21.0.0 development
extra-watch-webpack-plugin 1.0.3 development
fork-ts-checker-webpack-plugin 5.0.13 development
is-interactive 1.0.0 development
jest 26.2.2 development
jest-chain 1.1.5 development
jest-extended 0.11.5 development
jest-runner-eslint 0.10.0 development
jest-watch-typeahead 0.6.0 development
nodemon 2.0.4 development
npm-run-all 4.1.5 development
openapi-mass-generator 0.1.2 development
prettier 2.0.5 development
rimraf 3.0.2 development
source-map-loader 1.0.1 development
start-server-webpack-plugin 2.2.5 development
stryker-cli 1.0.0 development
supertest 4.0.2 development
terser 4.8.0 development
terser-webpack-plugin 3.0.8 development
ts-jest 26.1.4 development
ts-loader 8.0.1 development
ts-node 8.10.2 development
tsconfig-paths 3.9.0 development
typescript 3.9.7 development
webpack 4.44.1 development
webpack-cli 3.3.12 development
webpack-node-externals 2.5.0 development
webpackbar 4.0.0 development
@nestjs/common 7.4.2
@nestjs/core 7.4.2
@nestjs/microservices 7.4.2
@nestjs/platform-express 7.4.2
amqp-connection-manager 3.2.0
amqplib 0.6.0
aws-sdk 2.724.0
axios 0.19.2
body-parser 1.19.0
class-transformer 0.3.1
class-validator 0.12.2
cors 2.8.5
delay 4.4.0
dotenv 8.2.0
express 4.17.1
express-winston 4.0.5
fasy 7.0.1
fs-extra 9.0.1
lodash 4.17.19
logform 2.2.0
moment 2.27.0
multer 1.4.2
reflect-metadata 0.1.13
routing-controllers 0.8.1
runtypes 5.0.1
rxjs 6.6.2
serialize-javascript 4.0.0
set-cookie-parser 2.4.6
uuid 8.3.0
winston 3.3.3

services/worker/poetry.lock pypi

apipkg 1.5 develop
astroid 2.3.3 develop
atomicwrites 1.3.0 develop
attrs 19.3.0 develop
colorama 0.4.3 develop
coverage 5.0.3 develop
data-science-types 0.2.5.post1 develop
entrypoints 0.3 develop
execnet 1.7.1 develop
flake8 3.7.9 develop
flake8-bugbear 19.8.0 develop
flake8-docstrings 1.5.0 develop
importlib-metadata 1.5.0 develop
isort 4.3.21 develop
lazy-object-proxy 1.4.3 develop
mccabe 0.6.1 develop
more-itertools 8.2.0 develop
packaging 20.1 develop
pluggy 0.13.1 develop
py 1.8.1 develop
pycodestyle 2.5.0 develop
pydocstyle 5.0.2 develop
pyflakes 2.1.1 develop
pylint 2.4.4 develop
pytest 5.3.1 develop
pytest-cov 2.8.1 develop
pytest-forked 1.1.3 develop
pytest-instafail 0.4.1 develop
pytest-mock 1.13.0 develop
pytest-sugar 0.9.2 develop
pytest-xdist 1.30.0 develop
snowballstemmer 2.0.0 develop
termcolor 1.1.0 develop
typing 3.7.4 develop
vulture 1.2 develop
wcwidth 0.1.8 develop
wrapt 1.11.2 develop
yapf 0.29.0 develop
zipp 3.0.0 develop
biopython 1.71
boto3 1.11.13
botocore 1.14.17
certifi 2020.6.20
chardet 3.0.4
cycler 0.10.0
docutils 0.15.2
idna 2.10
jmespath 0.9.4
kiwisolver 1.1.0
matplotlib 3.1.3
mypy 0.750
mypy-extensions 0.4.3
numpy 1.15.1
pandas 1.0.5
phylo-treetime 0.5.1
pika 1.1.0
pyparsing 2.4.6
python-dateutil 2.8.1
pytz 2019.3
requests 2.24.0
s3transfer 0.3.3
scipy 1.4.1
six 1.14.0
typed-ast 1.4.1
typing-extensions 3.7.4.1
urllib3 1.25.8

services/api/yarn.lock npm

1318 dependencies

services/worker/yarn.lock npm

106 dependencies

services/web/yarn.lock npm

2268 dependencies