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GitHub / opencb / oskar
Oskar implements an analysis suite for working with genomic variation data. Some big data technologies such as Spark are used to provide big data analytics
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/opencb%2Foskar
Stars: 4
Forks: 1
Open Issues: 16
License: apache-2.0
Language: Java
Repo Size: 4.72 MB
Dependencies:
40
Created: over 5 years ago
Updated: 2 months ago
Last pushed: about 1 year ago
Last synced: about 2 months ago
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Dependencies
oskar-analysis/pom.xml
maven
- com.google.guava:guava 19.0
- org.apache.commons:commons-math3 ${commons-math.version}
- org.opencb.biodata:biodata-tools
- org.opencb.oskar:oskar-core
- org.reflections:reflections 0.9.10
- junit:junit test
oskar-core/pom.xml
maven
oskar-spark/pom.xml
maven
- org.apache.hadoop:hadoop-common ${hadoop.version} provided
- org.apache.spark:spark-mllib_2.11 ${spark.version} provided
- com.databricks:spark-avro_2.11 3.2.0
- junit:junit
- org.apache.parquet:parquet-avro ${parquet.version}
- org.apache.parquet:parquet-hadoop ${parquet.version}
- org.opencb.biodata:biodata-tools
- org.opencb.oskar:oskar-analysis
pom.xml
maven
- com.fasterxml.jackson.core:jackson-core 2.10.1
- com.fasterxml.jackson.core:jackson-databind 2.10.1
- com.fasterxml.jackson.dataformat:jackson-dataformat-yaml 2.10.1
- org.opencb.biodata:biodata-tools 2.0.4
- org.opencb.commons:commons-lib 4.0.4
- org.opencb.oskar:oskar-analysis 0.2.0
- org.opencb.oskar:oskar-core 0.2.0
- org.opencb.oskar:oskar-spark 0.2.0
- org.slf4j:slf4j-api 1.7.25
- org.slf4j:slf4j-log4j12 1.7.25
- junit:junit 4.12 test