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GitHub / plotly / dash-bio
Open-source bioinformatics components for Dash
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/plotly%2Fdash-bio
Stars: 513
Forks: 195
Open Issues: 67
License: mit
Language: Python
Repo Size: 284 MB
Dependencies:
2,232
Created: almost 6 years ago
Updated: about 1 month ago
Last pushed: 4 months ago
Last synced: 19 days ago
Commit Stats
Commits: 2235
Authors: 46
Mean commits per author: 48.59
Development Distribution Score: 0.528
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/plotly/dash-bio
Topics: bioinformatics, biojs, dash
Funding links: https://github.com/sponsors/plotly, https://plotly.com/products/consulting-and-oem/
Files
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Readme
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Dependencies
- actions/checkout v2.3.3 composite
- actions/github-script v3 composite
DESCRIPTION
cran
- R >= 3.0.2 depends
- manhattanly * depends
- dash * imports
package.json
npm
- @babel/core ^7.8.4 development
- @babel/plugin-syntax-dynamic-import ^7.8.3 development
- @babel/preset-env ^7.8.4 development
- @babel/preset-react ^7.8.3 development
- @plotly/webpack-dash-dynamic-import ^1.1.5 development
- babel-eslint ^10.0.3 development
- babel-jest ^24.5.0 development
- babel-loader ^8.0.6 development
- copyfiles ^2.2.0 development
- css-loader ^3.4.2 development
- enzyme ^3.11.0 development
- enzyme-adapter-react-16 ^1.15.2 development
- es-check ^5.0.0 development
- eslint ^6.8.0 development
- eslint-config-prettier ^6.10.0 development
- eslint-plugin-import ^2.20.1 development
- eslint-plugin-prettier ^3.1.2 development
- eslint-plugin-react ^7.18.3 development
- jest ^26.0.0 development
- jest-canvas-mock ^2.2.0 development
- jest-raw-loader ^1.0.1 development
- prettier ^1.19.1 development
- react-docgen ^3.0.0 development
- react-test-renderer ^16.12.0 development
- style-loader ^0.23.0 development
- webpack ^4.41.5 development
- webpack-cli ^3.3.10 development
- webpack-serve ^3.2.0 development
- circos git+https://github.com/plotly/circosJS.git#matthewchan15-zoom-pan-svg
- fast-memoize ^2.5.1
- fornac git+https://github.com/plotly/fornac.git#794ebd47766a8cff2020d83a5f9071201ef59d31
- ideogram ^1.16.0
- igv 2.6.8
- jsme-react git+https://github.com/nickmelnikov82/jsme-react.git#51d3c66279848eec049e0e52f6222381c3456007
- molecule-2d-for-react git+https://github.com/plotly/molecule-2d-for-react.git#b281d52610677a7c47e02911e186e9d35417e37a
- molecule-3d-for-react git+https://github.com/plotly/molecule-3d-for-react.git#c0f527d9ae1156bb0932790a683c74604100cd32
- ngl ^0.10.4
- pileup 0.7.0
- plotly.js ^1.52.2
- ramda ^0.26.0
- react 16.13.0
- react-alignment-viewer git+https://github.com/plotly/react-alignment-viewer.git#475c55a
- react-dom 16.13.0
- react-oncoprint ^1.2.3
- react-plotly.js ^2.4.0
- react-sequence-viewer git+https://github.com/plotly/react-sequence-viewer.git
- speck git+https://github.com/plotly/speck.git#1e4e11f59b831f295a2187637cdbb1aa1172eaae
dev-requirements.txt
pypi
- GEOparse >=1.1.0 development
- PubChemPy ==1.0.4 development
- biopython >=1.77 development
- colour * development
- cython >=0.19 development
- dash * development
- dash-daq ==0.5.0 development
- flake8 ==3.9.2 development
- gunicorn ==19.9.0 development
- jsonschema ==2.6.0 development
- matplotlib ==3.0.2 development
- numpy * development
- pandas >=0.24.2 development
- parmed * development
- periodictable * development
- plotly >=4.1.0 development
- pylint ==2.10.2 development
- requests ==2.21.0 development
- scikit-learn ==0.23.2 development
- scipy >=1.1.0 development
- six * development
setup.py
pypi
- GEOparse >=1.1.0
- biopython >=1.77
- biopython ==1.76
- colour *
- dash >=1.6.1
- jsonschema *
- pandas *
- parmed *
- periodictable *
- requests *
- scikit-learn >=0.20.1
- scipy *
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.4 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.4 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- dash * test
- dash-bio-utils * test
- dash-daq * test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test
- PubChemPy ==1.0.4 test
- cython >=0.19 test
- dash >=1.6.1 test
- dash-bio-utils ==0.0.6 test
- dash-daq ==0.2.2 test
- gunicorn ==19.9.0 test
- jsonschema ==2.6.0 test
- matplotlib ==3.0.2 test
- numpy * test
- pandas >=0.24.2 test
- plotly >=3.5.0 test
- requests ==2.21.0 test
- scikit-learn ==0.20.2 test
- scipy >=1.1.0 test