Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / s-rowland / bne_draft
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/s-rowland%2Fbne_draft
Stars: 2
Forks: 0
Open Issues: 0
License: mit
Language: HTML
Repo Size: 525 MB
Dependencies:
163
Created: almost 3 years ago
Updated: 10 months ago
Last pushed: over 1 year ago
Last synced: 10 months ago
Files
Loading...
Readme
Loading...
Dependencies
- R >= 2.10 depends
- cli >= 2.3.1 imports
- data.table >= 1.14.0 imports
- dht >= 1.0.3 imports
- dplyr >= 1.0.5 imports
- fst >= 0.9.4 imports
- glue >= 1.4.2 imports
- h3jsr >= 1.2.1 imports
- lubridate >= 1.7.9.2 imports
- magrittr * imports
- progressr >= 0.7.0 imports
- purrr >= 0.3.4 imports
- s3 >= 0.3.1 imports
- stringr >= 1.4.0 imports
- tidyr >= 1.1.3 imports
- testthat >= 3.0.0 suggests
- tibble >= 3.1.0 suggests
- withr * suggests
- 1.SETTINGUPYOUROWNBNERCONDAENVIRONMENTFORTHEFIRSTTIME *
- 2.ADDINGPACKAGESTOTHEBNERCONDAENVIRONMENT *
- 3.UPDATINGBNERWITHPACKAGESOTHERSHAVEADDED *
- Author *
- Date *
- ENDOFCHEATSHEET.txt *
- File *
- anacondasearchPACKAGE-NAME *
- condaactivateBNER *
- condadeactivateBNER *
- condaenvcreate--fileBNER.yml *
- condaenvexport--nameBNER *
- condaenvlist *
- condaenvupdate--nameBNER--fileBNER.yml--prune *
- condainstall-cconda-forgePACKAGE-NAME ==1.0.4
- condalist--explicit >requirements.txt
- pythonget_pacs_R.py *
- 1.FILEDESCRIPTIONS *
- 2.SETTINGUPYOUROWNBNERCONDAENVIRONMENTFORTHEFIRSTTIME *
- 3.ADDINGPACKAGESTOTHEBNERCONDAENVIRONMENT *
- 4.UPDATINGBNERWITHPACKAGESOTHERSHAVEADDED *
- 5.WARNINGS *
- 6. *
- Author *
- BNERcondaenvironment.Createdfromrequirements.txtbyget_pacs_R.py. *
- BNERcondaenvironmentareinsections2 ,3,and4.
- Date *
- Dependingonhowyourshellpromptisconfigured ,youshouldsee
- ENDOFREADME.txt *
- File *
- Ifa *
- IfthefileBNER.ymlcannotbefound ,seesection6.Otherwise,
- Note *
- NowthattheBNERcondaenvironmentissetup ,infuture
- Othercommandscanberunfromanywhere. *
- TableofContents *
- The *
- Youcanspecifyaspecificpackageversionnumberwithe.g. *
- above ,youshouldseea
- anacondasearchPACKAGE-NAME *
- anytimesoon... *
- anywhereontheserver *
- asof1 *
- beendeleted *
- beenusedinallBNEscriptsonSebastian *
- cd *
- cd.. *
- condaactivateBNER *
- condacreate--cloneR_env--nameBNER *
- condadeactivateBNER *
- condaenvcreate--fileBNER.yml *
- condaenvexport--nameBNER *
- condaenvironment.Instructionsonhowtouseittocreate *
- condaenvironment.It *
- condaenvironment.Neededfortheshellscript. *
- condaenvlist *
- condaenvupdate--nameBNER--fileBNER.yml--prune *
- condainstall-cconda-forgePACKAGE-NAME *
- condainstall-cconda-forgePACKAGE-NAME ==1.0.4
- condalist--explicit >requirements.txt
- condasearchPACKAGE-NAME *
- containingthepackages *
- createtheBNERcondaenvironmentfromR_env *
- datasetsSebastianisusingforpersonalanalysis ,somaybejustdownload
- differencesb *
- dlnm ,prism,tidycensus
- eitherofthefollowingcommands *
- essentiallybeperformingahardresetoftheBNERenvironmenttoits *
- file ,therequirements_BNER.txtfile,andtheBNERenvironmenthaveall
- followinglineanywhereontheserver *
- fromBNER.yml. *
- fromrequirements.txtinamorereadableformat *
- gitaddBNER.ymlrequirements.txt *
- gitcommit-m *
- gitpush *
- i.e.thereisnoneedtosetuptheenvironmentagaininstep1. *
- insidethedirectory *
- installationinthreeplaces *
- nngeo *
- onconda ,whetherthatbeduetoavailabilityordependencyissues.
- pythonget_pacs_R.py *
- runningthefollowingline *
- sake *
- serversessionsyousimplyactivateitwith *
- sourceinstall_BNER-specific_packages.sh *
- sourcerepository... *
- stateasof01 *
- the.ymlfileuptodate. *
- thecommandhasruncorrectly ,andrerunningthecommandinStep0
- thedatafromthemlocallyanduploadtoserver *
- theenvironment ,socontinuetoStep1.
- thepackages *
- tothebasicR_envcondaenvironmentinordertocreatetheBNER *
- usetheconda-forgechanneltoinstallpackages ,forconsistency
- workingwiththeenvironment ,runthefollowinglinefrom
- youcanskiptoStep2.Ifa *