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GitHub / santiagorevale / pickrepprot
PickRepProt is a pipeline to predict a representative protein sequence per gene from transcriptomes for Drosophila species.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/santiagorevale%2Fpickrepprot
Stars: 0
Forks: 0
Open Issues: 0
License: mit
Language: R
Repo Size: 18.6 KB
Dependencies:
7
Created: over 2 years ago
Updated: over 2 years ago
Last pushed: over 2 years ago
Last synced: about 1 year ago
Files
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Readme
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Dependencies
environment.yml
conda
- blast 2.9.0.*
- hmmer 3.3.0.*
- r-base 3.6.1.*
- r-optparse 1.6.4.*
- r-seqinr 3.6_1.*
- r-stringr 1.4.0.*
- transdecoder 5.5.0.*