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GitHub / smujiang / Re-stained_WSIs_Registration
Re-stained whole slide image alignment
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smujiang%2FRe-stained_WSIs_Registration
Stars: 27
Forks: 11
Open Issues: 0
License: gpl-3.0
Language: Python
Repo Size: 10.3 MB
Dependencies:
68
Created: over 5 years ago
Updated: 7 months ago
Last pushed: 8 months ago
Last synced: 6 months ago
Topics: alignment, image, pathology, re-stained, registration, whole-slide-image
Files
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Readme
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Dependencies
tools/environment.yml
conda
- altgraph 0.16.1
- blas 1.0
- ca-certificates 2019.3.9
- certifi 2019.3.9
- cloudpickle 0.8.1
- cycler 0.10.0
- cytoolz 0.9.0.1
- dask-core 1.2.0
- decorator 4.4.0
- freetype 2.10.0
- future 0.17.1
- hdf5 1.8.20
- icc_rt 2019.0.0
- icu 58.2
- imageio 2.5.0
- imutils 0.4.6
- intel-openmp 2019.3
- jpeg 9c
- kiwisolver 1.0.1
- libblas 3.8.0
- libcblas 3.8.0
- libflang 5.0.0
- liblapack 3.8.0
- liblapacke 3.8.0
- libopencv 3.4.2
- libpng 1.6.37
- libtiff 4.0.10
- libwebp 1.0.2
- llvm-meta 5.0.0
- macholib 1.11
- matplotlib-base 3.0.3
- mkl 2019.3
- networkx 2.3
- numpy 1.16.3
- olefile 0.46
- openblas 0.3.5
- opencv 3.4.2
- openmp 5.0.0
- openssl 1.1.1b
- pefile 2019.4.18
- pip 19.0.3
- py-opencv 3.4.2
- pycrypto 2.6.1
- pyinstaller 3.4
- pyparsing 2.4.0
- pyqt 5.9.2
- python 3.6.7
- python-dateutil 2.8.0
- pywavelets 1.0.3
- pywin32 224
- pywin32-ctypes 0.2.0
- qt 5.9.7
- scikit-image 0.15.0
- scikit-learn 0.20.3
- scipy 1.2.1
- setuptools 41.0.1
- sip 4.19.8
- six 1.12.0
- sqlite 3.26.0
- tk 8.6.9
- toolz 0.9.0
- tornado 6.0.2
- vc 14.1
- vs2008_runtime 9.0.30729.6161
- vs2015_runtime 15.5.2
- wheel 0.33.1
- wincertstore 0.2
- zlib 1.2.11