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GitHub / tgirke / systemPipeR
Project Website:
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tgirke%2FsystemPipeR
Stars: 48
Forks: 37
Open Issues: 2
License: None
Language: R
Repo Size: 337 MB
Dependencies:
44
Created: over 8 years ago
Updated: 2 months ago
Last pushed: 2 months ago
Last synced: 2 months ago
Files
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Readme
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Dependencies
DESCRIPTION
cran
- Biostrings * depends
- Rsamtools >= 1.31.2 depends
- ShortRead >= 1.37.1 depends
- methods * depends
- BiocGenerics * imports
- GenomicRanges * imports
- S4Vectors * imports
- SummarizedExperiment * imports
- crayon * imports
- ggplot2 * imports
- htmlwidgets * imports
- magrittr * imports
- stringr * imports
- yaml * imports
- AnnotationDbi * suggests
- BiocStyle * suggests
- DESeq2 * suggests
- DT * suggests
- GO.db * suggests
- GenomeInfoDb * suggests
- GenomicAlignments * suggests
- GenomicFeatures >= 1.31.3 suggests
- IRanges * suggests
- VariantAnnotation >= 1.25.11 suggests
- annotate * suggests
- batchtools * suggests
- dplyr * suggests
- edgeR * suggests
- grid * suggests
- kableExtra * suggests
- knitr * suggests
- limma * suggests
- rjson * suggests
- rmarkdown * suggests
- rtracklayer * suggests
- systemPipeRdata * suggests
- testthat * suggests
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/upload-artifact main composite
- r-lib/actions/setup-pandoc master composite
- r-lib/actions/setup-r v2 composite
- actions/checkout v2 composite
- ad-m/github-push-action master composite