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GitHub / udel-cbcb / ikg_v2_public
This repository holds the code for experiments and training scripts used in PredKinKG framework.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/udel-cbcb%2Fikg_v2_public
Stars: 1
Forks: 0
Open Issues: 0
License: gpl-3.0
Language: C++
Repo Size: 1.37 MB
Dependencies:
410
Created: over 2 years ago
Updated: almost 2 years ago
Last pushed: almost 2 years ago
Last synced: over 1 year ago
Files
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Readme
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Dependencies
pyproject.toml
pypi
- determined 0.17.1
- guildai 0.7.3
- kaleido 0.2.1
- knockknock ^0.1.8
- loguru 0.5.3
- matplotlib ^3.4.3
- networkx 2.6.2
- obonet 0.3.0
- optuna ^2.9.1
- p-tqdm 1.3.3
- pandas 1.3.2
- plotly ^5.3.0
- polyaxon ^1.11.2
- pybind11 2.7.0
- python 3.7.10
- ray ^1.6.0
- scikit-learn 0.24.2
- scipy ^1.7.1
- tqdm 4.62.2
docker/Dockerfile
docker
- determinedai/environments cuda-11.1-pytorch-1.9-lightning-1.3-tf-2.4-gpu-0.16.4 build
- determined 0.17.1
- guildai 0.7.3
- kaleido 0.2.1
- knockknock ^0.1.8
- loguru 0.5.3
- matplotlib ^3.4.3
- networkx 2.6.2
- obonet 0.3.0
- optuna ^2.9.1
- p-tqdm 1.3.3
- pandas 1.3.2
- plotly ^5.3.0
- polyaxon ^1.11.2
- pybind11 2.7.0
- python 3.7.10
- ray ^1.6.0
- scikit-learn 0.24.2
- scipy ^1.7.1
- tqdm 4.62.2
- loguru *
- networkx ==2.6.2
- numpy *
- obonet ==0.3.0
- p-tqdm *
- pandas *
- pytorch-lightning ==1.4.4
- scikit-learn ==0.24.2
- tensorboard ==2.5.0
- tqdm *
- knockknock ==0.1.8
- loguru ==0.5.3
- matplotlib ==3.4.3
- networkx ==2.6.2
- obonet ==0.3.0
- p-tqdm ==1.3.3
- pandas ==1.3.2
- plotly ==5.3.0
- scikit-learn ==0.24.2
- tqdm ==4.62.2
environment.yml
pypi
- absl-py ==0.13.0
- aiohttp ==3.7.4.post0
- aiohttp-cors ==0.7.0
- aioredis ==1.3.1
- alembic ==1.4.1
- async-timeout ==3.0.1
- attrs ==21.2.0
- backcall ==0.2.0
- backports-entry-points-selectable ==1.1.0
- blessings ==1.7
- cachetools ==4.2.2
- class-resolver ==0.0.12
- click ==7.1.2
- click-default-group ==1.2.2
- cliff ==3.8.0
- cloudpickle ==1.6.0
- cmaes ==0.8.2
- cmd2 ==2.1.1
- colorama ==0.4.4
- colorlog ==5.0.1
- cycler ==0.10.0
- daemonize ==2.5.0
- databricks-cli ==0.15.0
- dataclasses-json ==0.5.4
- decorator ==5.0.9
- dill ==0.3.4
- distlib ==0.3.2
- docdata ==0.0.3
- docker ==5.0.0
- entrypoints ==0.3
- filelock ==3.0.12
- flask ==2.0.1
- fsspec ==2021.7.0
- future ==0.18.2
- gitdb ==4.0.7
- gitpython ==3.1.18
- google-api-core ==1.30.0
- google-auth ==1.32.1
- google-auth-oauthlib ==0.4.4
- googleapis-common-protos ==1.53.0
- gpustat ==0.6.0
- greenlet ==1.1.0
- grpcio ==1.38.1
- gunicorn ==20.1.0
- hiredis ==2.0.0
- idna ==2.10
- imbalanced-learn ==0.8.0
- imblearn ==0.0
- iniconfig ==1.1.1
- ipython ==7.26.0
- ipython-genutils ==0.2.0
- isodate ==0.6.0
- itsdangerous ==2.0.1
- jedi ==0.18.0
- jsonpickle ==2.0.0
- jsonschema ==3.2.0
- kaleido ==0.2.1
- kiwisolver ==1.3.1
- loguru ==0.5.3
- mako ==1.1.4
- markdown ==3.3.4
- marshmallow ==3.12.1
- marshmallow-enum ==1.5.1
- matplotlib ==3.4.3
- matplotlib-inline ==0.1.2
- mlflow ==1.19.0
- more-click ==0.0.4
- msgpack ==1.0.2
- multidict ==5.1.0
- multiprocess ==0.70.12.2
- mypy-extensions ==0.4.3
- nvidia-ml-py3 ==7.352.0
- oauthlib ==3.1.1
- obonet ==0.3.0
- opencensus ==0.7.13
- opencensus-context ==0.1.2
- optuna ==2.8.0
- p-tqdm ==1.3.3
- packaging ==20.9
- pandas ==1.2.4
- parso ==0.8.2
- pathos ==0.2.8
- pbr ==5.6.0
- pexpect ==4.8.0
- pickleshare ==0.7.5
- pillow ==8.3.0
- pkginfo ==1.7.1
- platformdirs ==2.2.0
- plotly ==5.2.1
- pluggy ==1.0.0.dev0
- pox ==0.3.0
- ppft ==1.6.6.4
- prettytable ==2.1.0
- prometheus-client ==0.11.0
- prometheus-flask-exporter ==0.18.2
- prompt-toolkit ==3.0.20
- protobuf ==3.17.3
- psutil ==5.8.0
- ptyprocess ==0.7.0
- py ==1.10.0
- py-spy ==0.3.7
- pyaml ==21.8.3
- pyasn1 ==0.4.8
- pyasn1-modules ==0.2.8
- pydantic ==1.8.2
- pydeprecate ==0.3.1
- pygments ==2.10.0
- pykeen ==1.5.0
- pyperclip ==1.8.2
- pyrsistent ==0.18.0
- pystow ==0.1.6
- pytest ==6.2.4
- python-dateutil ==2.8.1
- python-editor ==1.0.4
- pytorch-lightning ==1.4.4
- pyvis ==0.1.9
- pyyaml ==5.4.1
- querystring-parser ==1.2.4
- ray ==1.4.1
- rdflib ==6.0.0
- redis ==3.5.3
- requests ==2.25.1
- requests-oauthlib ==1.3.0
- rsa ==4.7.2
- scikit-optimize ==0.8.1
- scipy ==1.7.1
- simplejson ==3.17.4
- sklearn ==0.0
- smmap ==4.0.0
- sqlalchemy ==1.4.20
- sqlparse ==0.4.1
- stevedore ==3.3.0
- stringcase ==1.2.0
- tabulate ==0.8.9
- tabview ==1.4.4
- tenacity ==8.0.1
- tensorboard ==2.5.0
- tensorboard-data-server ==0.6.1
- tensorboard-plugin-wit ==1.8.0
- tensorboardx ==2.4
- threadpoolctl ==2.1.0
- toml ==0.10.2
- torch-tb-profiler ==0.2.1
- torchmetrics ==0.5.0
- tqdm ==4.61.1
- traitlets ==5.0.5
- typing-inspect ==0.7.1
- virtualenv ==20.7.2
- wcwidth ==0.2.5
- websocket-client ==1.2.1
- werkzeug ==2.0.1
- yarl ==1.6.3
docker-compose.yml
docker
- sachinx0e/ikg 4.8