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GitHub / viggy-ravi / gene-prediction
Gene prediction algorithm to predict if fragment of prokaryotic genome contains a protein coding sequence.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/viggy-ravi%2Fgene-prediction
Stars: 0
Forks: 0
Open Issues: 15
License: None
Language: Jupyter Notebook
Repo Size: 5.46 MB
Dependencies:
136
Created: almost 4 years ago
Updated: over 2 years ago
Last pushed: over 1 year ago
Last synced: about 1 year ago
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Dependencies
requirements.txt
pypi
- Babel ==2.9.1
- Bottleneck ==1.3.2
- Cython ==0.29.24
- Jinja2 ==3.0.1
- Keras-Preprocessing ==1.1.2
- Markdown ==3.3.4
- MarkupSafe ==2.0.1
- Pillow ==8.3.1
- PyJWT ==2.1.0
- PySocks ==1.7.1
- Pygments ==2.10.0
- Send2Trash ==1.8.0
- Werkzeug ==1.0.1
- absl-py ==0.13.0
- aiohttp ==3.7.4
- anyio ==3.3.0
- argon2-cffi ==20.1.0
- astor ==0.8.1
- astunparse ==1.6.3
- async-generator ==1.10
- async-timeout ==3.0.1
- attrs ==21.2.0
- backcall ==0.2.0
- backports.functools-lru-cache ==1.6.4
- biopython ==1.78
- bleach ==4.1.0
- blinker ==1.4
- brotlipy ==0.7.0
- cachetools ==4.2.2
- certifi ==2021.5.30
- cffi ==1.14.6
- chardet ==3.0.4
- charset-normalizer ==2.0.4
- click ==8.0.1
- coverage ==5.5
- cryptography ==3.4.7
- cycler ==0.10.0
- debugpy ==1.4.1
- decorator ==5.1.0
- defusedxml ==0.7.1
- entrypoints ==0.3
- flatbuffers ==20210226132247
- fonttools ==4.25.0
- gast ==0.4.0
- google-auth ==1.33.0
- google-auth-oauthlib ==0.4.4
- google-pasta ==0.2.0
- grpcio ==1.36.1
- h5py ==2.10.0
- idna ==3.2
- importlib-metadata ==3.10.0
- ipykernel ==6.4.1
- ipython ==7.27.0
- ipython-genutils ==0.2.0
- jedi ==0.18.0
- joblib ==1.0.1
- json5 ==0.9.5
- jsonschema ==3.2.0
- jupyter-client ==7.0.2
- jupyter-core ==4.7.1
- jupyter-server ==1.11.0
- jupyterlab ==3.1.11
- jupyterlab-pygments ==0.1.2
- jupyterlab-server ==2.8.1
- kiwisolver ==1.3.1
- matplotlib ==3.4.2
- matplotlib-inline ==0.1.3
- mistune ==0.8.4
- mkl-fft ==1.3.0
- mkl-random ==1.2.2
- mkl-service ==2.4.0
- multidict ==5.1.0
- munkres ==1.1.4
- nbclassic ==0.3.1
- nbclient ==0.5.4
- nbconvert ==6.1.0
- nbformat ==5.1.3
- nest-asyncio ==1.5.1
- notebook ==6.4.3
- numexpr ==2.7.3
- numpy ==1.20.3
- oauthlib ==3.1.1
- olefile ==0.46
- opt-einsum ==3.3.0
- packaging ==21.0
- pandas ==1.3.2
- pandocfilters ==1.4.2
- parso ==0.8.2
- patsy ==0.5.1
- pexpect ==4.8.0
- pickleshare ==0.7.5
- pip ==21.2.2
- prometheus-client ==0.11.0
- prompt-toolkit ==3.0.20
- protobuf ==3.17.2
- ptyprocess ==0.7.0
- pyOpenSSL ==20.0.1
- pyasn1 ==0.4.8
- pyasn1-modules ==0.2.8
- pycparser ==2.20
- pyparsing ==2.4.7
- pyrsistent ==0.17.3
- python-dateutil ==2.8.2
- pytz ==2021.1
- pyzmq ==19.0.2
- requests ==2.26.0
- requests-oauthlib ==1.3.0
- requests-unixsocket ==0.2.0
- rsa ==4.7.2
- scikit-learn ==0.24.2
- scipy ==1.7.1
- seaborn ==0.11.2
- setuptools ==52.0.0.post20210125
- sip ==4.19.13
- six ==1.16.0
- sniffio ==1.2.0
- statsmodels ==0.12.2
- tensorboard ==2.4.0
- tensorboard-plugin-wit ==1.6.0
- tensorflow ==2.4.1
- tensorflow-estimator ==2.5.0
- termcolor ==1.1.0
- terminado ==0.12.1
- testpath ==0.5.0
- threadpoolctl ==2.2.0
- tornado ==6.1
- traitlets ==5.1.0
- typing-extensions ==3.10.0.0
- urllib3 ==1.26.6
- wcwidth ==0.2.5
- webencodings ==0.5.1
- websocket-client ==0.57.0
- wheel ==0.37.0
- wrapt ==1.12.1
- yarl ==1.6.3
- zipp ==3.5.0