git.embl.de
klaus/stat_methods_bioinf
Materials for a course on statistical methods in bioinformatics
Last synced at: 10 months ago - Stars: 2 - Forks: 0
boissonn/btm-2017
Repository for the BTM 2017, Git course
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-ellenberg/adaptive_feedback_mic_fiji
Tools for online image analysis of images acquired with Zeiss confocal microscopes.
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-ellenberg/Cecog_HMM_PostProcessing
Matlab scripts to process files generated by Cellcognition Create a mean statistics for events and grouped classes
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-zeller/SIAMCAT
Clean repository for the working version of SIAMCAT.
Last synced at: 10 months ago - Stars: 2 - Forks: 1
girardot/galaxy-dir-sync
Synchronises the content of a directory on the server with a galaxy library's folder. The server dir sub-structure is preserved and all files linked using symbolic links. The script can be started in daemon mode or placed under cron monitoring.
Last synced at: 10 months ago - Stars: 0 - Forks: 1
sharan/PDZnet_bioinfo_course-Sep2017
## PDZnet meeting: EMBL ### PhD Course – Bioinformatics #### September 26-29, 2017 A four days practical course in bioinformatics softwares and approaches with a particular focus on protein-protein interactions. Mandatory for PDZnet fellows.
Last synced at: 10 months ago - Stars: 0 - Forks: 1
hsanchez/unsam2017
Curso de biología estructural y funcional
Last synced at: 10 months ago - Stars: 0 - Forks: 0
gouw/PDZnet_bioinfo_course-Sep2017
## PDZnet meeting: EMBL ### PhD Course – Bioinformatics #### September 26-29, 2017 A four days practical course in bioinformatics softwares and approaches with a particular focus on protein-protein interactions. Mandatory for PDZnet fellows.
Last synced at: 10 months ago - Stars: 0 - Forks: 0
stamper/wp-markdown
Markdown files for Wordpress pages
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-zeller/team-pages
Markdown files for generating content on the team webpages
Last synced at: 10 months ago - Stars: 0 - Forks: 0
stamper/predoc-week-2017
Material for the EMBL-EBI Predoc Week, November 2017
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-zaugg/diffTF
Source code for "Genome-wide quantification of differential transcription factor activity: diffTF"
Last synced at: 10 months ago - Stars: 2 - Forks: 1
hsanchez/unsam_course_2017
Course material for the Bioinformatics Tools for Protein Structure, Disorder and Interaction Analysis November 21st-23rd, 2017 9:00 - 18:00 hrs Universidad Nacional de San Martín and IIB-INTECH
Last synced at: 10 months ago - Stars: 0 - Forks: 0
stamper/software-carpentry-nov2015
Materials for Python Scripting section of Nov 2015 Software Carpentry Course.
Last synced at: 10 months ago - Stars: 0 - Forks: 0
ejsing/alex123
ALEX123 is a software framework for analyzing high resolution shotgun and MALDI-based lipidomics data
Last synced at: 10 months ago - Stars: 0 - Forks: 0
fleck/ENA_downloader
Command line tool to download raw reads from ENA
Last synced at: 10 months ago - Stars: 0 - Forks: 0
milchevs/arrayProbeRemap
alpha-version of the reannotation pipeline (pdProbeRemap)
Last synced at: 10 months ago - Stars: 0 - Forks: 0
mainar/protein-bioinformatics-nov-2016
"Protein Bioinformatics for Beginners" course material
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-gbcs/Je
a suite to handle barcoded fastq files with (or without) Unique Molecule Identifiers (UMIs) and filter read duplicates using these UMIs
Last synced at: 10 months ago - Stars: 3 - Forks: 0
grp-almf/Feedback_Microscopy_Poster
This is the landing page for further information for our ALMF Poster on Feedback microscopy
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-ellenberg/mitotic_cell_atlas
Source code to generate the mitotic cell atlas
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-ellenberg/dual_zygotic_spindles_reichmann_2018
Last synced at: 10 months ago - Stars: 0 - Forks: 0
heriche/Data_integration_and_mining_with_graphs
Material for the CBNA course on data integration and mining with graphs
Last synced at: 10 months ago - Stars: 0 - Forks: 0
sharan/ITPP
Introduction to Python course materials
Last synced at: 10 months ago - Stars: 0 - Forks: 0
velten/PrimerDesign
Tools to design primers optimised for mutliplex PCRs and RT reactions.
Last synced at: 10 months ago - Stars: 0 - Forks: 0
mooijman/Probe_designer
Code to design smFISH probes
Last synced at: 10 months ago - Stars: 0 - Forks: 0
provazni/rna-seq-tutorial
RNAseq tutorial with basic linux introduction
Last synced at: 10 months ago - Stars: 1 - Forks: 0
mainar/linuxcommandline
Bio-IT Linux Commandline courses
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-bio-it-workshops/image-analysis-with-python
Course materials for image analysis with the scientific Python stack (`numpy`/`scipy`/`scikit-image`/`matplotlib`)
Last synced at: 10 months ago - Stars: 0 - Forks: 3
khawkins/surge-test
Let's see if we can get EMBL GitLab to deploy to Surge.sh
Last synced at: 10 months ago - Stars: 0 - Forks: 0
twenzel/image-analysis-with-python-2018
Materials for the ALMF/Bio-IT Image Analysis with Python series, running Spring/Summer 2018
Last synced at: 10 months ago - Stars: 0 - Forks: 0
mantas/diffTF
Source code for "Genome-wide quantification of differential transcription factor activity: diffTF"
Last synced at: 10 months ago - Stars: 0 - Forks: 0
rogon/Omicron_2016_Day_1
Jagiellonian University, Collegium Medicum - Omicron Facility 11-13.01.2016
Last synced at: 10 months ago - Stars: 1 - Forks: 0
rogon/Omicron_2016_Day_2
Jagiellonian University, Collegium Medicum - Omicron Facility 11-13.01.2016
Last synced at: 10 months ago - Stars: 1 - Forks: 0
mjamroz/lastday
Summary of my mechanical keyboard and black mouse.
Last synced at: 10 months ago - Stars: 0 - Forks: 0
rogon/Omicron_2016_Day_3
Jagiellonian University, Collegium Medicum - Omicron Facility 11-13.01.2016
Last synced at: 10 months ago - Stars: 1 - Forks: 0
sabinina/PhD_Thesis
Analysis of the Architecture of the Nuclear Pore Complex by 3D super-resolution fluorescence microscopy
Last synced at: 10 months ago - Stars: 0 - Forks: 0
tschmidt/oral-fecal-transmission-public
Analysis code for a study on oral-fecal microbial transmission.
Last synced at: 10 months ago - Stars: 0 - Forks: 0
ozturk/image-analysis-with-python-2018
Materials for the ALMF/Bio-IT Image Analysis with Python series, running Spring/Summer 2018
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-bio-it/singularity-service-example
A practical example about how to run a MongoDB service on demand in the HPC cluster.
Last synced at: 10 months ago - Stars: 1 - Forks: 2
romanov/proteotype_genetic_environment_impact
Scripts associated with the paper "Disentangling the impact of genetic and environmental factors on the proteotypes across individuals"
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-almf/interest-group-meeting-trainable-segmentation
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-gbcs/galaxy-dir-sync
Synchronises the content of a directory on the server with a galaxy library's folder. The server dir sub-structure is preserved and all files linked using symbolic links. The script can be started in daemon mode or placed under cron monitoring.
Last synced at: 10 months ago - Stars: 0 - Forks: 0
grp-hentze/snakemake-tutorial
Snakemake biological workflow management tutorial
Last synced at: 10 months ago - Stars: 2 - Forks: 3
deghou/drug_enrichment_tool
a tool to compute drug enrichnment
Last synced at: 10 months ago - Stars: 1 - Forks: 0
grp-gbcs/snakemake-tutorial
Snakemake biological workflow management tutorial
Last synced at: 10 months ago - Stars: 0 - Forks: 0
stamper/regex-introduction
Materials for a Bio-IT Workshop on Regular Expressions
Last synced at: 10 months ago - Stars: 1 - Forks: 0
bvelten/graper_analyses
Analyses scripts and Rmarkdown vignettes for graper manuscript.
Last synced at: 10 months ago - Stars: 0 - Forks: 0