Topic: "biclustering"
EpistasisLab/ebic Fork of athril/ebic
EBIC - AI-based parallel biclustering algorithm
Language: C++ - Size: 953 KB - Last synced at: over 1 year ago - Pushed at: almost 7 years ago - Stars: 19 - Forks: 4
nikitasigal/biclustlib
A biclustering library with datasets, evaluation measures and a benchmarking framework
Language: Python - Size: 17.2 MB - Last synced at: 24 days ago - Pushed at: about 3 years ago - Stars: 4 - Forks: 0
Alro10/clustering-course
Subspace clustering and coclustering course at the School of Electrical and Computer Engineering (FEEC-UNICAMP)
Language: Jupyter Notebook - Size: 761 KB - Last synced at: 4 months ago - Pushed at: almost 7 years ago - Stars: 4 - Forks: 0
eso28599/bisilhouette
Repository for the bisilhouette score R package
Language: HTML - Size: 1.49 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 2 - Forks: 0
aakash0017/BI-MOO
A multiobjective framework for biclustering of gene expression data. NSGA - 2 is used, for achieving multi-objective optimization of the biclusters. Biclusters are optimized on 3 objective functions: MSR, Row Variance, Area.
Language: Jupyter Notebook - Size: 28.4 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 1
krm58/Biclustering-SSVD
Implementation of the sparse singular value decomposition algorithm (Lee et al., 2010) to be used for Biclustering; Duke STA663 Final Project
Language: Jupyter Notebook - Size: 14.6 MB - Last synced at: 4 days ago - Pushed at: almost 8 years ago - Stars: 2 - Forks: 6
eso28599/resNMTF_paper
Code to recreate results from the "Multi-view biclustering via non-negative matrix tri-factorisation" paper.
Language: HTML - Size: 67 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 1 - Forks: 0
egotist0/Bayesian-Biclustering
Used generalized Bayesian and EM algorithms combined with a priori information for data biclustering.
Language: R - Size: 37.1 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
dimachine/OABicGWAS
Object-Attribute Biclustering for Genome-Wide Association Studies
Language: Jupyter Notebook - Size: 2.33 MB - Last synced at: almost 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0
dimachine/OAbic
Object-attribute biclustering, an early version
Language: Python - Size: 609 KB - Last synced at: almost 2 years ago - Pushed at: over 8 years ago - Stars: 1 - Forks: 1
dimitris-markopoulos/latent-semantic-clustering
Clustering book chapters with unsupervised ML—custom EM-GMM, sklearn baselines, and dimensionality reduction.
Language: Jupyter Notebook - Size: 87.2 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 1
Saeidhoseinipour/ZIBiclustering
We will extend the biclustering model to use Zero-Inflated Poisson (ZIP) and Zero-Inflated Negative Binomial (ZINB) distributions.
Language: Jupyter Notebook - Size: 8.21 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
Saeidhoseinipour/Intrococlust
Co-clustering, also known as biclustering or block clustering, is a powerful data analysis technique that uncovers hidden structures in complex datasets.
Size: 17.6 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
JalajVora/Master-Thesis-Visual-Analytics
This repository contains code base of my Master Thesis work named under "Pattern Detection in Tabular Data with shallow hierarchy: A Visual Analytics Case Study for Narrative Visualization"
Language: Jupyter Notebook - Size: 76.6 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
ShokofehVS/SecBic-CCA
SecBic-CCA: Secured Biclusterings - Cheng and Church Algorithm using CKKS scheme with Pyfhel Libary over gene expression data sets.
Language: Python - Size: 218 KB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
dhirajbag/triclustering-using-suffix_forest
UG Final Year Project based on Suffix Forest Based Tri-clustering
Language: Python - Size: 1010 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
hhuang5163/Book-Author-Clustering
Clustering exploration using the authors dataset
Language: Python - Size: 2.45 MB - Last synced at: 8 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
PedroCotovio/nclustgen
Python tool to generate biclustering and triclustering datasets programmatically.
Language: Python - Size: 12.6 MB - Last synced at: 24 days ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
ShokofehVS/SeCCA
Secured Cheng and Church Algorithm performs encrypted computations such as sum, or matrix multiplication in Python for biclustering algorithm
Language: Python - Size: 166 KB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
tdrose/mosbi
Multi-algorithm Ensemble Biclustering Method MoSBi | Publication: https://doi.org/10.1073/pnas.2118210119
Language: R - Size: 475 KB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
aureliolfdez/gbibit
gBiBit: A multi-GPU biclustering algorithm for binary datasets
Language: Cuda - Size: 46.9 MB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
vincentpun123/Visualization-Exercise-Breakfast-Cereals
Applying unsupervised learning methods to cereal nutritional data
Size: 1.71 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
aureliolfdez/gmsr
gMSR: A multi-GPU algorithm to accelerate a massive validation of biclusters
Language: Cuda - Size: 48.5 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
clevermx/biclasterization
Project for master thesis. It contain developed biclustering algorithm of gene expression data.
Language: HTML - Size: 1.45 MB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
lhm30/scikitlearn_clustermap_rdkit_bicluster_molecules
hacked code to bicluster molecules using rdkit and scikitlearn
Language: Python - Size: 1.95 KB - Last synced at: about 2 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
