count-data | Topic | Ecosyste.ms: Repos

Topic: "count-data"

PLN-team/PLNmodels

A collection of Poisson lognormal models for multivariate count data analysis

Language: R - Size: 110 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 55 - Forks: 18

gagneurlab/OUTRIDER

OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data

Language: R - Size: 10.9 MB - Last synced at: 15 days ago - Pushed at: 20 days ago - Stars: 52 - Forks: 12

jalal246/textics

📉 JavaScript Text Statistics that counts lines, words, chars, and spaces.

Language: JavaScript - Size: 163 KB - Last synced at: 24 days ago - Pushed at: almost 3 years ago - Stars: 36 - Forks: 3

rpact-com/rpact

rpact: Confirmatory Adaptive Clinical Trial Design and Analysis

Language: R - Size: 20.9 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 26 - Forks: 5

anjalisilva/MPLNClust

R Package With Shiny App to Perform and Visualize Clustering of Count Data via Mixtures of Multivariate Poisson-log Normal Model

Language: R - Size: 19.7 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 15 - Forks: 4

TeamMacLean/atacr

Analysing Capture Seq Count Data

Language: R - Size: 56.2 MB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 14 - Forks: 0

R Package to Perform Clustering of Three-way Count Data Using Mixtures of Matrix Variate Poisson-log Normal Model With Parameter Estimation via MCMC-EM, Variational Gaussian Approximations, or a Hybrid Approach Combining Both.

Language: R - Size: 2.1 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 0

BioGenies/countfitteR

Language: CSS - Size: 4.23 MB - Last synced at: 1 day ago - Pushed at: 2 months ago - Stars: 4 - Forks: 4

MFaymon/spINAR

Semiparametric and parametric estimation and bootstrapping of integer-valued autoregressive (INAR) models.

Language: R - Size: 5.01 MB - Last synced at: 8 days ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 1

GeoBosh/Countr

R package for flexible univariate count models based on renewal processes

Language: R - Size: 6.1 MB - Last synced at: 25 days ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 1

jalal246/textics-stream

Text Statistics For Node Streams

Language: JavaScript - Size: 58.6 KB - Last synced at: 24 days ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 0

ihmeuw-msca/CorrelatedCounts

Modeling correlated count data

Language: Python - Size: 1.7 MB - Last synced at: 4 months ago - Pushed at: almost 5 years ago - Stars: 4 - Forks: 0

blog-neas/INAr

Generation, estimation and testing of INteger Autoregressive models

Language: C++ - Size: 4.14 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0

cakraawijaya/WB-Register 📦

Web Programming Class | Final Project | Campus Assignment

Language: PHP - Size: 26.9 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 2 - Forks: 0

vpnsctl/mixpoissonreg

Mixed Poisson Regression for Overdispersed Count Data

Language: R - Size: 200 MB - Last synced at: 7 days ago - Pushed at: about 4 years ago - Stars: 2 - Forks: 0

krishan57gupta/ROSeq

ROSeq - A rank based approach to modeling gene expression with filtered and normalized read count matrix. Takes in the complete filtered and normalized read count matrix, the location of the two sub-populations and the number of cores to be used.

Language: R - Size: 4.86 MB - Last synced at: 11 days ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0

ICON-in-R/NMA

Minimal network meta-analysis with BUGS from R.

Language: R - Size: 14.4 MB - Last synced at: 6 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

monty-se/skellam

R package for statistical modeling with the Skellam distribution, supporting inference, random sampling, and regression for differences of independent Poisson counts.

Language: R - Size: 56.6 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

niamhmimnagh/TriplePoisson

A Bayesian model designed to estimate animal abundance from limited or scarce data on vestiges, such as faeces counts or other indirect indicators of presence. The approach is particularly useful in situations where direct observations of animals are challenging or impractical.

Language: R - Size: 13.7 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

zipkinlab/Davis_etal_2022_EcolAndEvol Fork of davisk93/Davis-et-al_Aerial-Survey

Davis, K. L., Silverman, E. D., Sussman, A. L., Wilson, R. R., Zipkin, E. F. (2022). Errors in aerial survey count data: Identifying pitfalls and solutions. Ecology and Evolution 12:e8733.

Language: R - Size: 1.17 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

dilsaddt/AldabraAtoll_Aldabra_giant_tortoise_seasonal_habitat_use

Analysis of seasonal habitat-use patterns of Aldabra giant tortoises of Aldabra Atoll, Seychelles using temporary emigration models.

Language: R - Size: 61.5 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

marinavannucci/dmbvs Fork of duncanwadsworth/dmbvs

R/C code for Bayesian variable selection for Dirichlet-multinomial regression models. Accompany paper: Wadsworth et al. (2016). An Integrative Bayesian Dirichlet-Multinomial Regression Model for the Analysis of Taxonomic Abundances in Microbiome data. BMC Bioinformatics 18:94.

Language: C - Size: 214 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 1

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