Topic: "i2b2"
i2b2-omop/i2o-transform
PCORnet Ontology to OMOP - beta!
Language: TSQL - Size: 30.5 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 11 - Forks: 4
covidclinical/visualization-notebooks
Jupyter Notebooks and other code for 4CE data visualizations.
Language: Jupyter Notebook - Size: 20.1 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 10 - Forks: 4
3abdel3ali/HAPI-FHIR-based-I2B2-Layer
Language: Java - Size: 3.73 MB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 7 - Forks: 3
kumc-bmi/naaccr-tumor-data
using NAACCR tumor registry data in i2b2, PCORNet CDM
Language: Python - Size: 4.22 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 3
MaximeWack/R2b2
R package to manage an i2b2 instance and import data
Language: R - Size: 1.16 MB - Last synced at: over 1 year ago - Pushed at: almost 8 years ago - Stars: 3 - Forks: 0
UTHSCSA-CIRD/chinotype
General purpose script for looking for over and under represented EHR facts in an i2b2 patient-set. Can be used for finding healthcare outcomes disparities, comorbidities, and who knows what else. The name is a portmanteau of Chi-squared and phenotype.
Language: Python - Size: 5 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
bokov/clinical_opendashboard
CODEHR: Clinical Open Dashboard for Electronic Health Records
Language: R - Size: 251 KB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 2 - Forks: 0
LREN-CHUV/i2b2-import
This library provides functions to import data into an I2B2 DB schema
Language: Python - Size: 254 KB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 2
lvn3668/BaselineSurveyResponseSimulator
Simulation of baseline survey response variables to store information in EPIC Number of variables: 495 Code: Java 8 Reads in csv file of variables and value range of permitted responses Use randomization to a) induce error b) generate valid responses, and simulate 1M responses, to use as prototype data to populate i2b2 deployments in support of the MVP project for VABHS
Language: Java - Size: 1.17 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 0
thehyve/glowing-bear-site 📦
Github pages for Glowing Bear website
Language: HTML - Size: 6.19 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 1
eurekaclinical/i2b2-export
i2b2 plugin and backend web applications for exporting data from the i2b2 web client
Language: Java - Size: 3.6 MB - Last synced at: 5 days ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 5
jtourille/i2b2-coref-task1c-converter
Language: Python - Size: 28.3 KB - Last synced at: over 2 years ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0
EDS-APHP-legacy/i2b2rplugin
This collection of i2b2 plugins are based on a R package loaded in OpenCPU
Language: R - Size: 252 KB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0
saichintha/i2b2-client-react
Redesigned i2b2 Web Client with improved data accessibility and reduced user interface complexity. Accompanies i2b2-backend. Based on React, Redux, Material-UI.
Language: JavaScript - Size: 15.3 MB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 1
saichintha/i2b2-backend
The backend web service server that i2b2-client talks to. Based on an Express server and Sequelize ORM.
Language: JavaScript - Size: 42 KB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0
ufbmi/cdm-i2b2-converter
Tools for converting PCORI CDM data to I2B2 format
Size: 1.95 KB - Last synced at: over 1 year ago - Pushed at: over 8 years ago - Stars: 1 - Forks: 1
daviden1013/LLM-IE_Benchmark
This is the benchmark repo for the LLM-IE Python package.
Language: Python - Size: 247 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
pranavanba/recover-sleep-measures Fork of Sage-Bionetworks/recover-sleep-measures
Code to generate derived sleep measures on a daily timescale
Language: R - Size: 48.8 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
Sage-Bionetworks/recoverutils
R package for RECOVER data summarization and egress with additional generally useful functions
Language: R - Size: 292 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 1
Sage-Bionetworks/recover-sleep-measures
Code to generate derived sleep measures on a daily timescale
Language: R - Size: 39.1 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 1
LREN-CHUV/ehr-to-i2b2
Import EHR data to I2B2.
Language: Python - Size: 46.9 KB - Last synced at: 25 days ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 2
hms-dbmi/c19i2b2-website
Website for c19i2b2 consortium project.
Language: CSS - Size: 822 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
nocwang/I2B2_fertility
Language: Jupyter Notebook - Size: 703 KB - Last synced at: 5 months ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
eurekaclinical/eurekaclinical-i2b2-integration-webapp
Proxy for web client users of eurekaclinical-i2b2-integration-service web services
Language: Java - Size: 135 KB - Last synced at: 22 days ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 4
eurekaclinical/eurekaclinical-i2b2-integration-service
Translation layer between i2b2 web services and Eureka! Clinical RESTful web services
Language: Java - Size: 170 KB - Last synced at: 8 days ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 3
eurekaclinical/i2b2-webclient-cas
Patched i2b2 webclient that delegates user authentication to Eureka! Clinical CAS
Language: JavaScript - Size: 30.7 MB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 4
bokov/FreeFI
Open Frailty Index: Rockwood methodology applied to EMR data
Language: PLSQL - Size: 35.2 KB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
eurekaclinical/i2b2-pm-cas
Patched i2b2 pm module that delegates user authentication to Eureka!
Language: Java - Size: 1.92 MB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 4
eurekaclinical/eurekaclinical-i2b2-integration-client
Library for accessing eurekaclinical-i2b2-integration-service RESTful APIs from Java applications
Language: Java - Size: 46.9 KB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 3
eurekaclinical/i2b2-client
Java client API for accessing i2b2 web services
Language: Java - Size: 73.2 KB - Last synced at: 9 days ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 4
UTHSCSA-CIRD/datafinisher
Language: Python - Size: 1.36 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
huberthickman/i2b2_posters
A collection of posters I have presented at the annual i2b2 conferences
Language: TeX - Size: 1.48 MB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0
HBPMedical/ehr-to-i2b2 Fork of LREN-CHUV/ehr-to-i2b2
Import EHR data to I2B2.
Language: Python - Size: 30.3 KB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
HBPMedical/i2b2-import Fork of LREN-CHUV/i2b2-import
This library provides functions to import data (MRI features and metadata) into an I2B2 DB schema
Language: Python - Size: 251 KB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
HBPMedical/i2b2-setup Fork of LREN-CHUV/i2b2-setup
Language: Python - Size: 54.7 KB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 1
LREN-CHUV/i2b2-setup
I2B2 star schema deployed with Alembic
Language: Python - Size: 54.7 KB - Last synced at: 5 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 2
eurekaclinical/i2b2-send-patient-set-plugin
i2b2 web client plugin for sending the patient set from an i2b2 query to a Eureka! Clinical or other service
Language: JavaScript - Size: 79.1 KB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 0 - Forks: 1