Topic: "maldi-tof-ms"
sgibb/MALDIquant
Quantitative Analysis of Mass Spectrometry Data
Language: R - Size: 1.72 MB - Last synced at: 4 months ago - Pushed at: 11 months ago - Stars: 62 - Forks: 25
BorgwardtLab/maldi_amr
Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"
Language: Jupyter Notebook - Size: 2.52 GB - Last synced at: 16 days ago - Pushed at: almost 3 years ago - Stars: 43 - Forks: 13
sgibb/readBrukerFlexData
Reads data files acquired by MALDI-TOF MS on Bruker Daltonics machines of the *flex series
Language: R - Size: 423 KB - Last synced at: about 2 months ago - Pushed at: 10 months ago - Stars: 13 - Forks: 5
piplus2/SPUTNIK
SPUTNIK R package
Language: R - Size: 8.36 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 4 - Forks: 3
LizzyParkerPannell/Untargeted_metabolomics_workflow
Collaborative workflow for untargeted metabolomics data processing and analysis using open-source tools. https://doi.org/10.3390/metabo13040463
Language: R - Size: 67.9 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 3
OpenChrom/OpenTyper
MALDI-TOF MS interface for OpenChrom/ChemClipse
Language: Java - Size: 178 KB - Last synced at: 8 days ago - Pushed at: almost 4 years ago - Stars: 4 - Forks: 4
ClavelLab/maldipickr
Dereplicate And Cherry-pick Mass Spectrometry Spectra
Language: R - Size: 9.31 MB - Last synced at: 7 days ago - Pushed at: 5 months ago - Stars: 2 - Forks: 1
aguerrerolopez/RMPrediction
Library that implements "Automatic antibiotic resistance prediction in Klebsiella pneumoniae based on MALDI-TOF mass spectra"
Language: Python - Size: 61.1 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 2
friendethan/SilverSpray_IMS
Script for analyzing intensity of olefin species from AgLDI IMS data. Uses MALDIquant, Cardinal and Tidyverse
Language: R - Size: 11.7 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0
sing-group/S2P
S2P is an open source application for fast and easy processing of 2D-gel and MALDI-based mass spectrometry protein data.
Language: HTML - Size: 5.13 MB - Last synced at: 24 days ago - Pushed at: almost 7 years ago - Stars: 2 - Forks: 0
friendethan/LipidMigration_IMS
R codes for plotting heatmap and line plots for MALDI TOF MS data from sublimated liver tissue. Uses MALDIquant and ggplot2
Language: R - Size: 11.7 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0
CeMOS-Mannheim/M2ara
M²ara, a R shiny web app for feature selection in cell-based assays using the package MALDIcellassay.
Language: HTML - Size: 2.02 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
friendethan/Gangliosides_IMS
Codes for analyzing the relative ganglioside intensities MS results of brain sections. Calculates total ion current using MALDIquant.
Language: R - Size: 7.81 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
friendethan/FlyTubules_IMS
Script for unsupervised analysis of microdissected fly tubule phospholipid signals as well as fly sections. Uses Cardinal
Language: R - Size: 29.3 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
friendethan/Strawberry_IMS
Data analysis pipeline for strawberry imaging mass spectrometry data in Food Chemistry publication. Uses Cardinal, MALDIquant and Tidyverse
Language: R - Size: 22.5 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0