Topic: "pcawg"
ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools
A CWL version of the Seqware OxoG workflow. This repository also contains scripts and dockerfiles used by the stand-alone versions of these components.
Language: Shell - Size: 117 KB - Last synced at: 5 months ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 6

ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation
This workflow performs annotation on SNV and INDEL VCFs.
Language: JavaScript - Size: 127 KB - Last synced at: 5 months ago - Pushed at: over 7 years ago - Stars: 4 - Forks: 0

steverozen/PCAWG7-plot-signatures
Code used to plot mutational signature profiles in https://doi.org/10.1101/322859. Please use the supported R package ICAMS instead.
Language: R - Size: 41 KB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

ICGC-TCGA-PanCancer/pcawg-minibam
Language: JavaScript - Size: 146 KB - Last synced at: 5 months ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 2

ICGC-TCGA-PanCancer/pcawg-oxog-filter
The CWL workflow to execute the OxoG filter.
Language: Python - Size: 30.3 KB - Last synced at: 5 months ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
