Topic: "science"
philippbayer/Things-a-scientist-is-suppposed-to-know
A comprehensive and long list of things a modern scientist is supposed to know
Size: 14.6 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 284 - Forks: 21
LucaOne/LucaOne
The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.
Language: Python - Size: 15.3 MB - Last synced at: 16 days ago - Pushed at: 29 days ago - Stars: 283 - Forks: 31
zjunlp/Mol-Instructions
[ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models
Language: Python - Size: 16.5 MB - Last synced at: 6 days ago - Pushed at: 9 months ago - Stars: 281 - Forks: 15
rossant/awesome-scientific-python
A curated list of awesome scientific Python resources
Language: Python - Size: 89.8 KB - Last synced at: 25 days ago - Pushed at: 11 months ago - Stars: 279 - Forks: 67
dylanrees/citizen-science
🔬 A repository of resources related to citizen, community-based and/or non-institutional science
Size: 160 KB - Last synced at: 4 days ago - Pushed at: 8 months ago - Stars: 274 - Forks: 20
rucio/rucio
Rucio - Scientific Data Management
Language: Python - Size: 59.1 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 268 - Forks: 359
tirthajyoti/Design-of-experiment-Python
Design-of-experiment (DOE) generator for science, engineering, and statistics
Language: Jupyter Notebook - Size: 547 KB - Last synced at: 2 months ago - Pushed at: over 1 year ago - Stars: 268 - Forks: 97
weisscharlesj/SciCompforChemists
Scientific Computing for Chemists is a free text for teaching basic computing skills to chemists using Python, Jupyter notebooks, and the other Python packages. This text makes use of a variety of packages including NumPy, SciPy, matplotlib, pandas, seaborn, nmrglue, SymPy, scikit-image, and scikit-learn.
Language: Jupyter Notebook - Size: 489 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 266 - Forks: 88
aztek/awesome-self-reference
A curated list of examples of self-reference in art, science, and technology
Size: 25.4 KB - Last synced at: 3 days ago - Pushed at: 10 months ago - Stars: 266 - Forks: 8
R74nCom/sandboxels
In-browser falling-sand simulation game with over 500 elements and thousands of reactions.
Language: JavaScript - Size: 30.6 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 263 - Forks: 533
FelixHenninger/lab.js
Online research made easy
Language: JavaScript - Size: 20.1 MB - Last synced at: about 1 month ago - Pushed at: 10 months ago - Stars: 259 - Forks: 110
J535D165/pyalex
A Python library for OpenAlex (openalex.org)
Language: Python - Size: 155 KB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 258 - Forks: 34
rwb27/openflexure_microscope
This repository has now moved to GitLab.com/openflexure/openflexure-microscope
Language: OpenSCAD - Size: 548 MB - Last synced at: 4 months ago - Pushed at: about 6 years ago - Stars: 251 - Forks: 57
imteekay/machine-learning-research
✨ ML/AI, Bio/Medicine & Science Research
Language: Jupyter Notebook - Size: 82 MB - Last synced at: 7 days ago - Pushed at: 8 days ago - Stars: 249 - Forks: 31
tunnckoCore/resources
:book: Huge curated collection (archive) of links of Tech, Science, Economics, Politics, Life, Philosophy, Conferences, Videos and much more resources from everyday surfing. :star: Since October 21, 2017.
Size: 2.8 MB - Last synced at: 4 days ago - Pushed at: over 5 years ago - Stars: 248 - Forks: 13
DavidBelicza/PHP-Science-TextRank
:zap: :elephant: TextRank (resource-efficient and low-cost automatic text summarisation) for PHP
Language: PHP - Size: 129 KB - Last synced at: 8 days ago - Pushed at: over 1 year ago - Stars: 243 - Forks: 40
nextstrain/nextclade
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
Language: Rust - Size: 61.9 MB - Last synced at: 3 days ago - Pushed at: 16 days ago - Stars: 240 - Forks: 64
FireBird-Technologies/Auto-Analyst-Streamlit
AI data scientist
Language: Python - Size: 5.88 MB - Last synced at: 2 months ago - Pushed at: 7 months ago - Stars: 239 - Forks: 43
ugeneunipro/ugene
UGENE is free open-source cross-platform bioinformatics software
Language: C++ - Size: 207 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 238 - Forks: 64
veg/hyphy
HyPhy: Hypothesis testing using Phylogenies
Language: HyPhy - Size: 57.8 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 234 - Forks: 69
bgruening/docker-galaxy
:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.
Language: Shell - Size: 2.38 MB - Last synced at: 6 days ago - Pushed at: 5 months ago - Stars: 233 - Forks: 136
immersivecognition/unity-experiment-framework
UXF - Framework for creating human behaviour experiments in Unity
Language: C# - Size: 8.34 MB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 231 - Forks: 48
yufree/sciguide
现代科研指北
Language: R - Size: 83.2 MB - Last synced at: 2 months ago - Pushed at: almost 2 years ago - Stars: 229 - Forks: 40
tardis-sn/tardis
TARDIS - Temperature And Radiative Diffusion In Supernovae
Language: Python - Size: 995 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 220 - Forks: 441
pierrehirel/atomsk
Atomsk: A Tool For Manipulating And Converting Atomic Data Files -
Language: Fortran - Size: 4.72 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 219 - Forks: 74
pelegs/maths_book
Planning for an entire maths LaTeX book
Language: TeX - Size: 68.1 MB - Last synced at: 8 days ago - Pushed at: about 2 years ago - Stars: 219 - Forks: 29
alchemistry/alchemlyb
the simple alchemistry library
Language: Python - Size: 2.3 MB - Last synced at: 4 days ago - Pushed at: 16 days ago - Stars: 218 - Forks: 54
bibcure/scihub2pdf
Downloads pdfs via a DOI number, article title or a bibtex file, using the database of libgen(sci-hub) , arxiv
Language: Python - Size: 1.29 MB - Last synced at: 1 day ago - Pushed at: about 5 years ago - Stars: 212 - Forks: 42
tuan3w/awesome-tech-rss
List of awesome RSS channels related to startup, science and technology.
Language: Python - Size: 36.1 KB - Last synced at: 7 days ago - Pushed at: over 1 year ago - Stars: 211 - Forks: 14
robintw/Py6S
A Python interface to the 6S Radiative Transfer Model
Language: Python - Size: 1.36 MB - Last synced at: 5 days ago - Pushed at: 12 months ago - Stars: 209 - Forks: 111
igordot/genomics
A collection of scripts and notes related to genomics and bioinformatics
Language: R - Size: 260 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 208 - Forks: 55
edwardlib/observations
Tools for loading standard data sets in machine learning
Language: Python - Size: 1.63 MB - Last synced at: 10 days ago - Pushed at: over 2 years ago - Stars: 204 - Forks: 40
robertjakob/rigorous
A comprehensive suite of tools, built to liberate science by making the creation, evaluation, and dissemination of research more transparent, affordable, and efficient.
Language: Python - Size: 153 KB - Last synced at: 7 days ago - Pushed at: 8 days ago - Stars: 200 - Forks: 14
henrysky/astroNN
Deep Learning for Astronomers with Keras
Language: Python - Size: 181 MB - Last synced at: 29 days ago - Pushed at: 7 months ago - Stars: 198 - Forks: 52
NCAR/VAPOR
VAPOR is the Visualization and Analysis Platform for Ocean, Atmosphere, and Solar Researchers
Language: C++ - Size: 77.4 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 190 - Forks: 50
polyanskiy/refractiveindex.info-database
Database of optical constants
Language: Python - Size: 32 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 190 - Forks: 57
miguelgfierro/sciblog
A blog made with django designed like a scientific paper written in LaTeX.
Language: JavaScript - Size: 7.39 MB - Last synced at: 4 months ago - Pushed at: 12 months ago - Stars: 184 - Forks: 28
Becksteinlab/GromacsWrapper
GromacsWrapper wraps system calls to GROMACS tools into thin Python classes (GROMACS 4.6.5 - 2024 supported).
Language: Python - Size: 11.9 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 178 - Forks: 54
symengine/symengine.py
Python wrappers for SymEngine
Language: Cython - Size: 4.26 MB - Last synced at: about 1 month ago - Pushed at: 3 months ago - Stars: 177 - Forks: 67
google/deepsomatic
DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing data.
Size: 66.4 KB - Last synced at: 9 days ago - Pushed at: 2 months ago - Stars: 173 - Forks: 20
mkearney/tidyversity
🎓 Tidy tools for academics
Language: R - Size: 480 KB - Last synced at: 3 months ago - Pushed at: almost 7 years ago - Stars: 171 - Forks: 16
tskit-dev/tskit
Population-scale Ancestral Recombination Graph (ARG) library
Language: Python - Size: 19.4 MB - Last synced at: 3 days ago - Pushed at: 12 days ago - Stars: 166 - Forks: 77
nschloe/cplot
:rainbow: Plot complex functions
Language: Python - Size: 75.1 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 166 - Forks: 22
JLindemann42/Atomic-Periodic-Table.Android
'Atomic - Periodic Table' for Android
Language: Kotlin - Size: 356 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 164 - Forks: 3
tirthajyoti/doepy
Design of Experiment Generator. Read the docs at: https://doepy.readthedocs.io/en/latest/
Language: Python - Size: 5.68 MB - Last synced at: 29 days ago - Pushed at: over 1 year ago - Stars: 159 - Forks: 42
landgreen/landgreen.github.io
Landgreen's public site: physics notes, n-gon
Language: JavaScript - Size: 196 MB - Last synced at: 11 days ago - Pushed at: 12 days ago - Stars: 158 - Forks: 46
sherpa/sherpa
Fit models to your data in Python with Sherpa.
Language: Python - Size: 54.9 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 157 - Forks: 53
MaximilianKohler/HumanMicrobiome
Human Microbiome wiki
Size: 97.7 KB - Last synced at: 3 months ago - Pushed at: almost 2 years ago - Stars: 156 - Forks: 11
RahulBirCodes/awesome-steam
An awesome list of resources for specific science, technology, engineering, art, and math (STEAM) classes that students and teachers can use to supplement their learning
Size: 192 KB - Last synced at: 6 days ago - Pushed at: about 1 year ago - Stars: 154 - Forks: 30
aces/Loris
LORIS is a web-accessible database solution for longitudinal multi-site studies.
Language: PHP - Size: 101 MB - Last synced at: about 2 hours ago - Pushed at: 1 day ago - Stars: 153 - Forks: 183
andrejewski/periodic-table
Periodic elements data
Language: JavaScript - Size: 76.2 KB - Last synced at: 30 days ago - Pushed at: over 3 years ago - Stars: 153 - Forks: 94
gentoo/sci
[MIRROR] Gentoo Science Overlay
Language: Shell - Size: 38.3 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 150 - Forks: 168
silx-kit/silx
silx toolkit
Language: Python - Size: 52 MB - Last synced at: 10 days ago - Pushed at: 11 days ago - Stars: 149 - Forks: 77
ngless-toolkit/ngless
NGLess: NGS with less work
Language: Haskell - Size: 14.1 MB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 148 - Forks: 25
ppinard/matplotlib-scalebar
Provides a new artist for matplotlib to display a scale bar, aka micron bar.
Language: Python - Size: 1.28 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 148 - Forks: 29
SymbolicML/DynamicQuantities.jl
Efficient and type-stable physical quantities in Julia
Language: Julia - Size: 2.77 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 146 - Forks: 25
pydap/pydap
A Python library implementing the Data Access Protocol (DAP, aka OPeNDAP).
Language: Python - Size: 31.2 MB - Last synced at: 5 days ago - Pushed at: 7 days ago - Stars: 144 - Forks: 87
fenwii/LibraryBookSearchEngine
LibraryBookSearchEngine，link librarys of all 197 Countries, search all resources of books，for student, research,图书馆图书搜索引擎,在家链接全球197个国家的图书馆，搜索图书资源,学生必备，科研必备，学习必备工具。
Size: 338 MB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 144 - Forks: 28
LaurentRDC/scikit-ued
Collection of algorithms and routines for (ultrafast) electron diffraction and scattering
Language: Python - Size: 24.2 MB - Last synced at: 1 day ago - Pushed at: 6 months ago - Stars: 143 - Forks: 21
navassherif98/IBM_Data_Science_Professional_Certification
This repository contains all the resources and solution to quizzes given and asked in IBM Data Science Professional Certification.
Language: Jupyter Notebook - Size: 12.2 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 143 - Forks: 147
Chris00/ocaml-csv
CSV library for OCaml
Language: OCaml - Size: 308 KB - Last synced at: about 3 hours ago - Pushed at: 9 months ago - Stars: 142 - Forks: 24
zhh2001/zhh2001.github.io
学习笔记，涵盖 SDN、PDP、Go 等多个领域，包括科研和开发等多方面
Language: HTML - Size: 30.8 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 141 - Forks: 0
algebraic-solving/msolve
Library for Polynomial System Solving through Algebraic Methods
Language: C - Size: 3.2 MB - Last synced at: 15 days ago - Pushed at: 16 days ago - Stars: 141 - Forks: 29
dougy147/scitopdf
bash script to quickly fetch, download and open scientific papers from Sci-Hub's database.
Language: Shell - Size: 4.07 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 138 - Forks: 11
damask-multiphysics/DAMASK
Düsseldorf Advanced Material Simulation Kit (Read-only mirror)
Language: Fortran - Size: 285 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 137 - Forks: 52
osfclient/osfclient
A python library and command-line client for file storage on OSF
Language: Python - Size: 424 KB - Last synced at: 6 days ago - Pushed at: almost 2 years ago - Stars: 136 - Forks: 57
codeisscience/code-is-science
Scientific code needs to be open source and peer reviewed
Language: CSS - Size: 3.76 MB - Last synced at: 1 day ago - Pushed at: over 2 years ago - Stars: 136 - Forks: 32
arogozhnikov/arogozhnikov.github.io
'Brilliantly wrong' blog, Machine Learning visualizations live here
Language: HTML - Size: 71.7 MB - Last synced at: 4 months ago - Pushed at: 7 months ago - Stars: 131 - Forks: 52
sanderlab/scPerturb
scPerturb: A resource and a python/R tool for single-cell perturbation data
Language: Jupyter Notebook - Size: 209 MB - Last synced at: 4 days ago - Pushed at: 5 months ago - Stars: 129 - Forks: 8
njtierney/rmd4sci
Rmarkdown for Scientists
Language: RMarkdown - Size: 3.25 MB - Last synced at: 23 days ago - Pushed at: 3 months ago - Stars: 127 - Forks: 43
scipp/scipp
Multi-dimensional data arrays with labeled dimensions
Language: C++ - Size: 29.9 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 126 - Forks: 21
InteractiveComputerGraphics/fenris
A library for advanced finite element computations in Rust
Language: Rust - Size: 1.33 MB - Last synced at: 7 days ago - Pushed at: almost 2 years ago - Stars: 126 - Forks: 6
expyriment/expyriment
Platform-independent lightweight Python library for designing and conducting timing-critical behavioural and neuroimaging experiments
Language: Python - Size: 8.63 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 125 - Forks: 41
marius311/boinc-server-docker
A Docker multi-container application that runs a BOINC server
Language: Shell - Size: 225 KB - Last synced at: 4 months ago - Pushed at: about 2 years ago - Stars: 124 - Forks: 65
SENPAI-Molecular-Dynamics/SENPAI
Molecular dynamics simulation software
Language: C - Size: 1.05 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 123 - Forks: 16
edamontology/edamontology
EDAM is a domain ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concepts related to analysis, modelling, optimisation, and data life cycle. Targetting usability by diverse users, EDAM's structure is relatively simple, divided into 4 sections: Topic, Operation, Data, and Format.
Language: Shell - Size: 21.2 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 122 - Forks: 60
Pioreactor/pioreactor
Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.
Language: Python - Size: 19.3 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 121 - Forks: 10
abinit/abipy
Open-source library for analyzing the results produced by ABINIT
Language: Python - Size: 430 MB - Last synced at: 29 days ago - Pushed at: 29 days ago - Stars: 121 - Forks: 103
kayak/fireant
Data analysis and reporting tool for quick access to custom charts and tables in Jupyter Notebooks and in the shell.
Language: Python - Size: 2.33 MB - Last synced at: 6 days ago - Pushed at: over 1 year ago - Stars: 121 - Forks: 20
mdboom/pytoshop
Library for reading and writing Photoshop PSD and PSB files
Language: Python - Size: 2.19 MB - Last synced at: 1 day ago - Pushed at: almost 3 years ago - Stars: 121 - Forks: 24
CenterForOpenScience/ember-osf-web
Ember front-end for the Open Science Framework
Language: TypeScript - Size: 42.4 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 120 - Forks: 59
Dallinger/Dallinger
Laboratory automation for the behavioral and social sciences; human culture on a chip.
Language: Python - Size: 19.1 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 119 - Forks: 40
nodeGame/nodegame
Complete nodegame repository with examples and documentation
Language: JavaScript - Size: 4.14 MB - Last synced at: 1 day ago - Pushed at: 10 months ago - Stars: 119 - Forks: 17
asoplata/open-science-resources
A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.
Size: 92.8 KB - Last synced at: 16 days ago - Pushed at: almost 3 years ago - Stars: 119 - Forks: 18
datascienceid/deep-learning-resources
A curated list of deep learning resources books, courses, papers, libraries, conferences, sample code, and many more.
Size: 6.84 KB - Last synced at: 1 day ago - Pushed at: almost 4 years ago - Stars: 119 - Forks: 37
ermshaua/claspy
ClaSPy: A Python package for time series segmentation.
Language: Jupyter Notebook - Size: 9.27 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 118 - Forks: 7
JGCRI/hector
The Hector Simple Climate Model
Language: C++ - Size: 75.6 MB - Last synced at: 4 days ago - Pushed at: 23 days ago - Stars: 118 - Forks: 49
mschroen/Science.md
An easy framework for drafting scientific documents: Write (Markdown), Compile (PDF, Word, HTML), Share.
Language: HTML - Size: 1.26 MB - Last synced at: 1 day ago - Pushed at: about 5 years ago - Stars: 118 - Forks: 35
silx-kit/pyFAI
Fast Azimuthal Integration in Python
Language: Python - Size: 528 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 115 - Forks: 100
FastTrackOrg/FastTrack
FastTrack is a cross-platform application designed to track multiple objects in video recording.
Language: C++ - Size: 324 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 114 - Forks: 20
JuliaEarth/geospatial-data-science-with-julia
Geospatial Data Science with Julia
Language: TeX - Size: 432 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 113 - Forks: 17
DeSciWorldDAO/awesome-desci
A curated list of awesome DeSci resources, projects, events, articles and more
Size: 178 KB - Last synced at: 12 days ago - Pushed at: 12 months ago - Stars: 112 - Forks: 28
bsumlin/PyMieScatt
A collection of forward and inverse Mie solving routines for Python 3, based on Bohren and Huffman's Mie Theory derivations
Language: Python - Size: 4.38 MB - Last synced at: 2 months ago - Pushed at: 8 months ago - Stars: 111 - Forks: 43
cverluise/PatCit
Making Patent Citations Uncool Again
Language: Jupyter Notebook - Size: 24.8 MB - Last synced at: 2 days ago - Pushed at: about 2 years ago - Stars: 111 - Forks: 12
jennschiffer/jortsort 📦
the official website for jortSorting
Language: HTML - Size: 10.9 MB - Last synced at: over 1 year ago - Pushed at: about 9 years ago - Stars: 111 - Forks: 5
materialsvirtuallab/mlearn 📦
Benchmark Suite for Machine Learning Interatomic Potentials for Materials
Language: Python - Size: 70.7 MB - Last synced at: 10 days ago - Pushed at: over 3 years ago - Stars: 108 - Forks: 27
Drapegnik/bsu
🎓Repository for university labs on FAMCS, BSU
Language: Java - Size: 22.7 MB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 106 - Forks: 36
BenJuan26/OpenSkyStacker
Multi-platform stacker for deep-sky astrophotography.
Language: C++ - Size: 124 MB - Last synced at: 15 days ago - Pushed at: over 4 years ago - Stars: 106 - Forks: 14
sirius-ms/sirius
SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)
Language: Java - Size: 162 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 105 - Forks: 29
Mathpix/mpx-cli
CLI for document conversion for scientific documents, powered by Mathpix OCR
Language: JavaScript - Size: 2.06 MB - Last synced at: 17 days ago - Pushed at: over 1 year ago - Stars: 105 - Forks: 16
