MeHelmy/princess

Language: Python - Size: 1.51 MB - Last synced at: 17 days ago - Pushed at: 3 months ago - Stars: 79 - Forks: 8

gaolabtools/scNanoGPS

Single cell Nanopore sequencing data for Genotype and Phenotype

Language: Python - Size: 27 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 51 - Forks: 5

dbmi-bgm/granite Fork of bgm-cwg/novoCaller

A collection of software to work with genomic variants

Language: Python - Size: 46 MB - Last synced at: 17 days ago - Pushed at: 9 months ago - Stars: 6 - Forks: 0

davidhwyllie/findNeighbour2

Compares large numbers of bacterial sequences

Language: Python - Size: 52.9 MB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 3 - Forks: 2

davidhwyllie/findNeighbour3

Bacterial relatedness server, supporting sequence clustering & mixture detection

Language: Python - Size: 53.6 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 2

coldham10/SCarborSNV

SCarborSNV is an efficient algorithm for phylogeny aware genotyping of single cell genomes, using dynamic programming and neighbor joining.

Language: C - Size: 25.3 MB - Last synced at: about 1 year ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0

alex137911/BME499

Code for 4th year honours thesis project at the University of Waterloo.

Language: Shell - Size: 26.4 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

NCI-CGR/HPV_low_VAF_SNV_prediction

Predicting true low-VAF SNVs in HPV using triplicate NGS samples and machine learning

Language: Jupyter Notebook - Size: 17.3 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0