Topic: "spatially-variable-genes"
jianhuupenn/SpaGCN
SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network
Language: Python - Size: 54.1 MB - Last synced at: 6 months ago - Pushed at: over 1 year ago - Stars: 200 - Forks: 59
YangLabHKUST/MCube
A unified framework for identification of cell-type-specific spatially variable genes in spatial transcriptomic studies
Language: R - Size: 30.4 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 6 - Forks: 0
boyiguo1/tpSVG
Scalable thin plate spline model to analyze spatially resolved transcirptomics data
Language: R - Size: 4.72 MB - Last synced at: 1 day ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0
estfernan/boost
A collection of novel and standard statistical techniques for detecting spatially variable (SV) genes in spatial transcriptomics (ST) data.
Language: R - Size: 4.72 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0
xzhoulab/SPRINT
Identifying spatial pattern genes
Language: R - Size: 3.19 MB - Last synced at: about 2 years ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0
