suffix-tree 17 burrows-wheeler-transform 16 algorithms 14 lcp-array 12 bwt 9 bioinformatics 8 cpp 8 suffixarray 8 segment-tree 7 data-structures 7 trie 7 algorithm 6 fenwick-tree 6 hashing 6 sais 5 python 5 fm-index 5 string-search 5 edit-distance 5 binary-search-tree 4 external-memory 4 avl-tree 4 longest-common-prefix 4 queue 4 lcp 4 java 4 union-find 4 binary-search 4 splay-tree 4 string-matching 4 kmp-algorithm 4 dynamic-programming 3 heavy-light-decomposition 3 rust 3 unordered-maps 3 divsufsort 3 pattern-matching 3 parallel-algorithms 3 graph-algorithms 3 competitive-programming 3 compression 3 string-algorithms 3 knuth-morris-pratt 3 interval-tree 3 bsdiff 3 stack 3 priority-queue 3 btree 3 disjoint-set 2 manacher-s-algorithm 2 search 2 b-tree 2 indexing 2 saca 2 genomics 2 algortihm 2 string 2 golang 2 suffix-trie 2 deflate 2 lz77 2 minimum-spanning-trees 2 document-array 2 edmonds-karp-algorithm 2 linear-programming 2 sparse-table 2 min-heap 2 binary-indexed-tree 2 binary-diffing 2 doubly-linked-list 2 hash-table 2 z-function 2 delta-encoding 2 external-merge-sort 2 software-update 2 lfu-cache 2 fmindex 2 lru-cache 2 heap 2 text-indexing 2 advanced-data-structures 2 substring-search 2 alignment 2 binary-heap 2 max-flow 2 c 2 aho-corasick 2 tarjan-algorithm 2 shortest-path-algorithm 2 sorting-algorithms 2 sorting 2 bst 2 suffix-automaton 2 burrows-wheeler-transformation 2 cplusplus 2 graphs 2 external-sorting 2 avl 2 string-collections 2 string-indexing 2