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Package Usage: conda: caiman

CaImAn implements a set of essential methods required in analysis pipelines for large scale calcium imaging data. It implements fast, scalable algorithms for motion correction, source extraction, spike deconvolution, and component registration across multiple days. It is suitable for both two-photon and one-photon fluorescence microscopy data, and can be run in both batch and online modes.
30 versions
Latest release: over 1 year ago
1 dependent package

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/caiman

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/flatironinstitute%2FCaImAn

Dependent Repos 1

nel-lab/FIOLA
  • 1.8.3 sandbox/src/environment.yml

Size: 1.99 MB - Last synced: about 1 month ago - Pushed: 7 months ago

nel-lab/mesmerize-core
High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn
  • >=1.9.10 environment.yml

Size: 1.8 MB - Last synced: 15 days ago - Pushed: 15 days ago

willyh101/live2p
  • environment.yml

Size: 1.95 MB - Last synced: 3 months ago - Pushed: 3 months ago