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Package Usage: conda: caiman
CaImAn implements a set of essential methods required in analysis pipelines for large scale calcium imaging data. It implements fast, scalable algorithms for motion correction, source extraction, spike deconvolution, and component registration across multiple days. It is suitable for both two-photon and one-photon fluorescence microscopy data, and can be run in both batch and online modes.
30 versions
Latest release: over 1 year ago
1 dependent package
View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/caiman
View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/flatironinstitute%2FCaImAn
Dependent Repos 1
nel-lab/FIOLA
- 1.8.3 sandbox/src/environment.yml
Size: 1.99 MB - Last synced: about 1 month ago - Pushed: 7 months ago
nel-lab/mesmerize-core
High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn- >=1.9.10 environment.yml
Size: 1.8 MB - Last synced: 15 days ago - Pushed: 15 days ago