Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
Package Usage: conda: coreutils
2 versions
Latest release: almost 4 years ago
View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/coreutils
Dependent Repos 32
flatsurf/flatsurf
Translation Surfaces in C++/Python- libflatsurf/environment.yml
Size: 8.02 MB - Last synced: 4 months ago - Pushed: 4 months ago
flatsurf/e-antic
Embedded algebraic number fields- libeantic/environment.yml
- pyeantic/environment.yml
Size: 8.19 MB - Last synced: 4 months ago - Pushed: 4 months ago
rchapman2000/de-novo-assembly-pipeline
- 9.1 environment.yml
Size: 60.5 KB - Last synced: over 1 year ago - Pushed: over 1 year ago
cjfiscus/Kmer-it
- 8.25.* workflow/envs/environment.yaml
Size: 42 MB - Last synced: 10 months ago - Pushed: over 3 years ago
edotau/fishingcluster
- 8.31 workflows/atacseq/environment.yml
Size: 3.74 MB - Last synced: about 1 year ago - Pushed: about 3 years ago
flatsurf/arbxx
C++/Python wrappers for the Arb library- libarbxx/environment.yml
- pyarbxx/environment.yml
Size: 1.18 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
flatsurf/unique-factory
A header-only library to add UniqueFactory semantics to deduplicate parent structures- environment.yml
Size: 198 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
antmicro/symbiflow-examples-bot
- eos-s3/environment.yml
Size: 27.5 MB - Last synced: about 2 months ago - Pushed: almost 3 years ago
russHyde/code_as_data
Analysis of code in R dev packages (for a planned talk)- 8.31.* conda/environment.yml
Size: 295 KB - Last synced: 3 months ago - Pushed: 8 months ago
polio-nanopore/piranha
- 9.1.* environment.yml
Size: 34.9 MB - Last synced: 11 days ago - Pushed: 11 days ago
ExternalRepositories/standardese Fork of standardese/standardese
A (work-in-progress) nextgen Doxygen for C++- environment.yml
Size: 2.49 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
flatsurf/gmpxxll
The missing long long functions in GMP's C++ interface- environment.yml
Size: 5.5 MB - Last synced: 7 months ago - Pushed: 7 months ago
steamboat/titan-nf
A Nextflow wrapper around Titan-GC. Documentation available at https://steamboat.gitlab.io/titan-nf/- 8.32.* environment.yml
Last synced: over 1 year ago
mr-eyes/denovo-rnaseq
De novo assembly, Differential gene expression, and annotation workflow- 8.25 environment.yml
Size: 1.79 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
cnrgh/LodSeq
LodSeq performs the genetic linkage analysis across families, by computing lod-scores given a gvcf file and a related tfam pedigree file- environment.yaml
Last synced: over 1 year ago
elarsonneur/LodSeq
LodSeq performs the genetic linkage analysis across families, by computing lod-scores given a gvcf file and a related tfam pedigree file- environment.yaml
Last synced: over 1 year ago
sunsetyerin/BIOF501_term_project
repository for UBC BIOF501 term project- >=8.31 envs/environment.yaml
Size: 75 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
armossa/Drought_index
Practice reproducible research while studying the state of drought around the globe- >=9.1 environment.yml
Size: 65.5 MB - Last synced: 5 months ago - Pushed: 5 months ago
sinanugur/MirMachine
MirMachine, a command line tool to detect microRNA homologs in genome sequences.- 8.31.* environment.yml
Size: 43 MB - Last synced: about 1 month ago - Pushed: 3 months ago
saraedum/e-antic Fork of flatsurf/e-antic
embedded algebraic number fields (on top of antic)- libeantic/environment.yml
Size: 4.41 MB - Last synced: 5 months ago - Pushed: 5 months ago
saraedum/intervalxt Fork of flatsurf/intervalxt
Interval Exchange Transformations- libintervalxt/environment.yml
Size: 1020 KB - Last synced: 4 months ago - Pushed: 4 months ago
saraedum/flatsurf Fork of flatsurf/flatsurf
- libflatsurf/environment.yml
Size: 4.25 MB - Last synced: 4 months ago - Pushed: 4 months ago
standardese/standardese
A (work-in-progress) nextgen Doxygen for C++- environment.yml
Size: 2.49 MB - Last synced: about 2 months ago - Pushed: 11 months ago
gw-odw/odw-2018
Software for Open Data Workshop 2018- 8.31 environment.yml
Size: 21.1 MB - Last synced: 10 days ago - Pushed: 10 days ago
biocompute-objects/bco-ro-example-chipseq
Packaging a IEEE 2791 described BioCompute Object as RO-Crate, using nf-core/chipseq as example- 8.* environment.yml
Size: 107 MB - Last synced: about 2 months ago - Pushed: about 3 years ago
gw-odw/odw-2020
Software tutorials for GW Open Data Workshop #3- 8.31 environment.yml
Size: 20.4 MB - Last synced: about 2 months ago - Pushed: over 3 years ago
IanSudbery/alvarez_et_al
Code and other scripts for Alvarez-Beneyas et al 2020- 8.31 environment.yml
Size: 41.2 MB - Last synced: 10 months ago - Pushed: over 2 years ago
lifebit-ai/jax-sci-nf
- environment.yml
Size: 3.91 KB - Last synced: about 1 month ago - Pushed: over 3 years ago
James-S-Santangelo/glue_dnaSeqQC
- 8.25 environment.yaml
Size: 9.51 MB - Last synced: 10 months ago - Pushed: about 1 year ago
mbh038/drought_index
A project to practise reproducible research practices while studying the state of drought around the world.- 8.32.* environment.yml
Size: 98.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
rchapman2000/ont-ref-based-assembly
A reference-based assembly pipeline designed for analysis of Oxford Nanopore sequencing data- 9.1.* environment.yml
Size: 47.9 KB - Last synced: about 1 year ago - Pushed: about 1 year ago
rchapman2000/ont-de-novo-assembly
A de novo assembly pipeline for sequencing data using Oxford Nanopore Technologies- 9.1.* environment.yml
Size: 10.7 KB - Last synced: about 1 year ago - Pushed: about 1 year ago
rpetit3/illumina-cleanup 📦
A simple pipeline for pre-processing Illumina FASTQ files.- 8.30 environment.yml
Size: 4.07 MB - Last synced: 3 months ago - Pushed: 3 months ago
transXpress/transXpress-nextflow
transXpress: a Nextflow pipeline for rapid de novo transcriptome assembly and annotation- 8.31 environment.yml
Size: 47 MB - Last synced: about 1 year ago - Pushed: about 2 years ago
shilpagarg/DipAsm
- 8.25.* docker/environment.yml
- 8.25.* environment.yml
Size: 124 MB - Last synced: 7 months ago - Pushed: almost 4 years ago
AstrobioMike/binder-conda-amplicon
- 9.1.* environment.yml
Size: 18.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
AstrobioMike/binder-conda-unix
- 9.1.* environment.yml
Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
pommevilla/lamps_incubation
- >=9.1 environment.yml
Size: 84.8 MB - Last synced: 9 months ago - Pushed: 9 months ago
socialgene/sgnf
SocialGene's Nextflow Pipeline- dockerfiles/hmmer/environment.yaml
- dockerfiles/hmmer_plus/environment.yaml
- >=9.3 dockerfiles/sgpy/sgpy_base/environment.yaml
Size: 2.82 MB - Last synced: 3 months ago - Pushed: 3 months ago
stain/ro-index-paper
Research Object Index paper (draft)- >8.30* environment.yml
Size: 88.6 MB - Last synced: about 1 month ago - Pushed: about 4 years ago
Heinriciro/standardese Fork of standardese/standardese
A (work-in-progress) nextgen Doxygen for C++- environment.yml
Size: 2.48 MB - Last synced: 11 months ago - Pushed: over 1 year ago
szhan/onekg_analysis
Evaluation of genotype imputation methods using the unified genealogy dataset- 9.3 environment.yml
Size: 512 KB - Last synced: 11 months ago - Pushed: 11 months ago
Arul16psp05/odw-2019 Fork of gw-odw/odw-2019
- 8.31 environment.yml
Size: 35.5 MB - Last synced: 11 months ago - Pushed: about 4 years ago
battyone/odw-2020 Fork of gw-odw/odw-2020
Software tutorials for GW Open Data Workshop #3- 8.31 environment.yml
Size: 20.4 MB - Last synced: about 2 months ago - Pushed: over 3 years ago
battyone/odw-2018 Fork of gw-odw/odw-2018
Software for Open Data Workshop 2018- 8.31 environment.yml
Size: 23 MB - Last synced: about 2 months ago - Pushed: over 4 years ago
battyone/odw-2019 Fork of gw-odw/odw-2019
- 8.31 environment.yml
Size: 35.5 MB - Last synced: about 2 months ago - Pushed: about 4 years ago
nf-core/pgdb Fork of bigbio/pgdb
The ProteoGenomics database generation workflow creates different protein databases for ProteoGenomics data analysis.- 8.31.* environment.yml
Size: 3.06 MB - Last synced: 22 days ago - Pushed: 22 days ago
socialgene/sgpy
Python package for creating and interacting with graph databases of protein domains and their genome coordinates- 9.3 docker/sgpy_base/environment.yaml
Size: 17.1 MB - Last synced: 29 days ago - Pushed: 30 days ago
pschloss/pds_drought_index
- 9.1.* workflow/envs/environment.yml
Size: 34.9 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
pommevilla/one_week_ahead
Snakemake pipeline to reproduce the results in the forthcoming paper "One week ahead prediction of harmful algal blooms in Iowa lakes"- >=9.1 environment.yml
Size: 86.6 MB - Last synced: 4 months ago - Pushed: 6 months ago
roidocampo/dotfiles
My configuration files- apps/aViewer.app/Contents/Resources/environment.yml
Size: 36.6 MB - Last synced: 4 months ago - Pushed: 4 months ago
riffomonas/drought_index
A project to practice reproducible research practices while studying the state of drought around the world- >=9.1 environment.yml
Size: 335 MB - Last synced: about 2 hours ago - Pushed: about 16 hours ago
openradar/erad2022
Open Source Weather Radar Software Course- binder/environment.yml
- environment.yml
Size: 235 MB - Last synced: 2 months ago - Pushed: 2 months ago
elinneb/596-15_S2024_processSingleMoutput_R
- 9.1.* environment.yml
Size: 93.6 MB - Last synced: 2 months ago - Pushed: 2 months ago
nf-core/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!- 8.30.* modules/nf-core/cat/fastq/environment.yml
- 9.1.* modules/nf-core/custom/tabulartogseacls/environment.yml
- 9.1.* modules/nf-core/custom/tabulartogseagct/environment.yml
- 8.25.* modules/nf-core/gnu/sort/environment.yml
- 9.4.* modules/nf-core/kraken2/build/environment.yml
- 9.4.* modules/nf-core/kraken2/kraken2/environment.yml
- 9.1.* modules/nf-core/md5sum/environment.yml
- 9.1.* modules/nf-core/shasum/environment.yml
Size: 146 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
nf-cmgg/preprocessing
Preprocessing workflow for sequencing data at CMGG- 9.1.* modules/nf-core/md5sum/environment.yml
Size: 6.63 MB - Last synced: 2 months ago - Pushed: 2 months ago
marchoeppner/ncrna-annotation
Annotate ncRNAs from assemblies using Rfam- 8.30.* modules/cat_fastq/environment.yml
Size: 72.6 MB - Last synced: 18 days ago - Pushed: 18 days ago
eQTLGen/ConvertVcf2Hdf5
eQTLGen phase II ipeline for converting imputed .vcf files into .hdf5 format.- 8.31.* environment.yml
Size: 49.3 MB - Last synced: about 1 month ago - Pushed: about 1 month ago
BirgitRijvers/emc-cancermicro
- 9.4.* modules/nf-core/kraken2/build/environment.yml
- 9.4.* modules/nf-core/kraken2/kraken2/environment.yml
Size: 1.13 MB - Last synced: 27 days ago - Pushed: 28 days ago
nf-core/scnanoseq
Single-cell/nuclei pipeline for data derived from Oxford Nanopore- 8.30.* modules/nf-core/cat/fastq/environment.yml
Size: 21 MB - Last synced: 13 days ago - Pushed: 14 days ago
genomic-medicine-sweden/tomte
- 8.30.* modules/nf-core/cat/fastq/environment.yml
Size: 69.1 MB - Last synced: 15 days ago - Pushed: 15 days ago
eQTLGen/CisTransColoc
- 9.1.* environment.yml
Size: 34.2 KB - Last synced: about 19 hours ago - Pushed: about 20 hours ago