Ecosyste.ms: Repos

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Package Usage: conda: gsd

GSD (General Simulation Data) is a file format specification and a library to read and write it. The package also contains a python module that reads and writes hoomd schema gsd files with an easy to use syntax.
34 versions
Latest release: over 1 year ago
3 dependent packages

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/gsd

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/glotzerlab%2Fgsd

Dependent Repos 28

cmelab/planckton 📦
Reproducible exploration of organic photovoltaic morphology self-assembly using molecular dynamics.
  • 2.4.2.* environment.yml

Size: 1.35 MB - Last synced: 4 months ago - Pushed: 4 months ago

cmelab/morphct
  • 2.4.2.* environment.yml

Size: 101 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

rwsmith7531/reproducibility_study Fork of mosdef-hub/reproducibility_study
Repo for data collection, discussion, etc for a MoSDeF reproducibility study.
  • environment.yml

Size: 76.8 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

mosdef-hub/MoSDeF-workshop
Collection of tutorials and example workflows for MoSDeF workshop at FOMMS 2022
  • environment.yml

Size: 10.8 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago

mosdef-hub/mosdef_slitpore
A variety of water and carbon slit-pore simulations
  • environment.yml

Size: 6.71 MB - Last synced: about 2 months ago - Pushed: over 3 years ago

glass-w/protein_orientation
Protein orientation: Analysis of protein domain pitch
  • 2.1.0.* environment.yml

Size: 43 MB - Last synced: about 1 year ago - Pushed: over 3 years ago

calpolyccg/MDSAPT_demo
  • 2.5.1 environment.yml

Size: 6.61 MB - Last synced: 9 months ago - Pushed: over 1 year ago

mosdef-hub/reproducibility_study
Repo for data collection, discussion, etc for a MoSDeF reproducibility study.
  • environment.yml

Size: 22.7 MB - Last synced: about 14 hours ago - Pushed: about 15 hours ago

PTC-CMC/cybercamp
Rapid overview of molecular simulation
  • environment.yml

Size: 7.34 MB - Last synced: 9 months ago - Pushed: almost 2 years ago

mosdef-hub/mosdef-workflows
Sample molecular simulation workflows using a MoSDeF and community tools
  • 2.* hoomd_lj/environment.yml

Size: 1.51 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago

mosdef-hub/mbuild_tutorials
A set of tutorials to introduce new users to mBuild
  • environment.yml

Size: 9.45 MB - Last synced: about 2 months ago - Pushed: almost 3 years ago

bigginlab/nav-alt-splice
Code from Will Glass for Voltage-gated Sodium channel analysis
  • 2.4.1 environment.yml

Size: 3.11 MB - Last synced: about 1 year ago - Pushed: about 2 years ago

mosdef-hub/gmso_showcase
Interactive demo/tutorial of current GMSO features and design decisions.
  • >=2.0 environment.yml

Size: 506 KB - Last synced: about 2 months ago - Pushed: almost 2 years ago

glotzer/hoomd-examples
  • 1.0.1 environment.yml

Size: 52.2 MB - Last synced: over 1 year ago

cmelab/p3ht_validation
  • environment.yml

Size: 29.7 MB - Last synced: about 1 year ago - Pushed: about 2 years ago

joaander/hoomd-examples
  • 1.0.1 environment.yml

Size: 55.1 MB - Last synced: 11 months ago - Pushed: 11 months ago

cmelab/rhaco
  • 1.5.2.* environment.yml

Size: 22.7 MB - Last synced: over 1 year ago

mosdef-hub/foyer_tutorials
A set of tutorials to introduce new users to Foyer
  • environment.yml

Size: 172 KB - Last synced: about 2 months ago - Pushed: almost 3 years ago

ELELAB/pyinteraph2
development repository for PyInteraph2
  • 2.4.2.* environment.yaml

Size: 138 MB - Last synced: 7 months ago - Pushed: 8 months ago

amburan/citrine_tetrahedron_problem
  • environment.yml

Size: 23.6 MB - Last synced: over 1 year ago

glotzer/aiche-2018-hoomd-signac-freud
  • >=1.5.4 environment.yml

Size: 9.91 MB - Last synced: over 1 year ago

cmelab/Advanced-Sampling
  • environment.yml

Size: 1.41 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

j-degroot/ACMDD
  • 2.5.3 P10_Docking/environment.yml

Size: 68 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

ramanishsingh/reproducibility_study Fork of mosdef-hub/reproducibility_study
Repo for data collection, discussion, etc for a MoSDeF reproducibility study.
  • environment.yml

Size: 15.2 MB - Last synced: 9 months ago - Pushed: 9 months ago

pol-sb/simul-protein-small-molecule
Tools to study LLPS in IDP systems using the OpenMM python API
  • 2.5.3 modules/environment.yaml

Size: 3.04 MB - Last synced: 6 months ago - Pushed: 6 months ago

fjclark/ani_mmml_corrections
Scripts for carrying out mm->ml corrections with ANI
  • 2.6.1 environment.yml

Size: 4.92 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

CalCraven/reproducibility_study-1 Fork of mosdef-hub/reproducibility_study
Repo for data collection, discussion, etc for a MoSDeF reproducibility study.
  • environment.yml

Size: 27.8 MB - Last synced: 8 months ago - Pushed: 8 months ago

chrisjonesBSU/polybinderCG
  • environment.yml

Size: 152 KB - Last synced: 2 months ago - Pushed: 2 months ago

dotmet/mpcmd
A hydrodynamic simulation package
  • environment.yml

Size: 195 KB - Last synced: about 16 hours ago - Pushed: 8 months ago

mikemhenry/aiche-2019-hoomd-signac-freud
  • >=1.5.4 environment.yml

Size: 4.86 MB - Last synced: about 1 year ago - Pushed: over 4 years ago

GOMC-WSU/Publications
Workflows used in various publications
  • 2023/Crawford_1/environment.yml

Size: 119 KB - Last synced: 2 months ago - Pushed: 2 months ago

daveb-dev/hoomd_binder
  • 1.0.1 environment.yml

Size: 1.95 KB - Last synced: 9 months ago - Pushed: about 4 years ago

cmelab/Anisotropic-Particle-Simulation
  • 2.9.* environment.yml

Size: 423 KB - Last synced: 10 months ago - Pushed: 10 months ago

joaander/reproducibility_study Fork of mosdef-hub/reproducibility_study
Repo for data collection, discussion, etc for a MoSDeF reproducibility study.
  • 2.6.0.* environment.yml

Size: 12.5 MB - Last synced: 9 months ago - Pushed: 9 months ago

Brandman88/IDPs.hydro
  • 2.5.2 environment.yml

Size: 167 KB - Last synced: 8 months ago - Pushed: 8 months ago

marjanalbooyeh/CG_force_learner
Utilizing neural networks to learn LJ potential
  • environment.yml

Size: 3.95 MB - Last synced: 3 months ago - Pushed: 6 months ago

open2c/polychrom-hoomd
  • 2.9 environment.yml

Size: 37.1 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

cmelab/cmeutils
Useful functions by and for the CME lab
  • >=3.0 environment.yml

Size: 650 KB - Last synced: 17 days ago - Pushed: 17 days ago

cmelab/grits
A toolkit for working with coarse-grain systems
  • >=3.0 environment.yml

Size: 3.54 MB - Last synced: 9 days ago - Pushed: 10 days ago

EricBoittier/FF-Energy
  • 2.8.1 environment.yml

Size: 2.98 GB - Last synced: 11 days ago - Pushed: 11 days ago