humanfriendly | conda | Package Usage

brisbane/hpc-container-maker-recipes

Recipes to drive creation of specific containers for hpc-container-maker

8.0 jupyter/environment.yml

Size: 36.1 KB - Last synced: 26 days ago - Pushed: over 1 year ago

brucemoran/tumour_only

Tumour-only DNA sequencing analysis

9.1 environment.yaml

Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

casrssk/WGS-analysis-in-C_trachomatis

8.2 linux/sample/envs/environment.yml

Size: 7.39 MB - Last synced: 4 months ago - Pushed: about 2 years ago

thespacedoctor/soxspipe

The pipeline for the SOXS instrument

10.0.* environment.yml

Size: 16.7 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

OSU-BMBL/PGRP-Grape-Grafting

Adapting Perennial Crops for Climate Change: Graft Transmissible Effects of Rootstocks on Grapevine Shoots

9.1 environment.yml

Size: 2.22 MB - Last synced: 9 days ago - Pushed: about 3 years ago

luisacusick/VC-Optimus

Bioinformatics pipeline to take short reads, align them to a reference, and call SNPs.

4.18 environment.yml

Size: 138 KB - Last synced: about 1 year ago - Pushed: about 3 years ago

vaqm2/custom_gwas

Python Code using CyVCF2 to run custom GWAS models on imputed VCF files

10.0.* environment.yml

Size: 958 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago

broadinstitute/malaria-amplicon-pipeline

9.2.* environment.yml

Size: 171 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

rosalindfranklininstitute/rfi-downloader

Batch downloader for URLs

environment.yml

Size: 1.29 MB - Last synced: 19 days ago - Pushed: almost 3 years ago

jgil-sevenbridges/validate_fastqc_multiqc_nf2

9.2.* environment.yml

Size: 139 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago

sbilge/nextflow-clinvap

6.1.* environment.yml

Size: 8.23 MB - Last synced: 5 months ago - Pushed: 12 months ago

quadram-institute-bioscience/dadaist2

Dadaist2 🟨 Highway to R

9.2 lab/class/environment.yml

Size: 39.4 MB - Last synced: 3 months ago - Pushed: 3 months ago

jiangweiyao/RefNAAP

Reference based Nanopore assembly analysis pipeline

9.1.* environment.yml

Size: 76.4 MB - Last synced: 29 days ago - Pushed: about 3 years ago

gonzalosm98/scRNA-SeqAnalysis

10.0 environment.yml

Size: 62.5 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

jorgeltd/ikaros-mutations-id

Pipeline for the identification of two snv of interest in the ikaros gen

4.18 environment.yml

Last synced: 11 months ago

j-degroot/ACMDD

10.0 P10_Docking/environment.yml

Size: 68 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

b0b0haha/SafeGo

一个为人们在新冠疫情期间提供出行建议的网站

4.16.1 environment.yaml

Size: 69.7 MB - Last synced: 23 days ago - Pushed: over 1 year ago

fnattino/ESMValCore Fork of ESMValGroup/ESMValCore

ESMValCore: A community tool for pre-processing data from Earth system models in CMIP and running analysis scripts.

environment.yml

Size: 131 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

jbloomlab/barcoded_flu_pdmH1N1

Barcoded pdmH1N1 virus hashing experiment

8.2 environment.yml

Size: 642 MB - Last synced: 4 months ago - Pushed: 10 months ago

in-rolls/electoral_rolls

PDFs of Indian Electoral Rolls

4.4.1 tools/environment.yml

Size: 8.72 MB - Last synced: 11 days ago - Pushed: 11 days ago

duncanberger/nxf-BATQual

Bacterial genome assembly, annotation and typing pipeline.

10.0 environment.yaml

Size: 321 KB - Last synced: 10 months ago - Pushed: 10 months ago

gw-odw/odw-2018

Software for Open Data Workshop 2018

4.18 environment.yml

Size: 23 MB - Last synced: 24 days ago - Pushed: over 4 years ago

gw-odw/odw-2020

Software tutorials for GW Open Data Workshop #3

8.2 environment.yml

Size: 20.4 MB - Last synced: about 1 month ago - Pushed: over 3 years ago

IanSudbery/alvarez_et_al

Code and other scripts for Alvarez-Beneyas et al 2020

9.1 environment.yml

Size: 41.2 MB - Last synced: 9 months ago - Pushed: over 2 years ago

mestill7/HiC-fast

HiC processing pipeline for fast alignment

10.0 environment.yaml

Size: 32.2 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago

mestill7/Snake-RNA

Pipeline for summarizing expression data for batches of public RNA-seq datasets

9.1 environment.yaml

Size: 128 KB - Last synced: about 2 months ago - Pushed: over 3 years ago

zhanlilz/grid-nasa-lvis-l2

Grid laser-shot-based LVIS L2 data from NASA into raster data

8.2 environment.yml

Size: 61.5 KB - Last synced: 4 months ago - Pushed: over 3 years ago

amjltc295/SQL_Homework

Project for students to practice basic SQL commands

4.16.1 environment.yaml

Size: 62.5 KB - Last synced: about 1 year ago - Pushed: over 5 years ago

amjltc295/PythonHomework

Homework project for students to practice Python, Git and GitHub Flow

4.17 environment.yaml

Size: 59.4 MB - Last synced: about 1 year ago - Pushed: over 3 years ago

amjltc295/N_Bit_Quantized_Face_Recognition

4.18 environment.yaml

Size: 200 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago

DrDougPhD/Thingiverse-Downloader

Utility script to download stuff from Thingiverse

6.1 environment.yml

Size: 63.5 KB - Last synced: 10 months ago - Pushed: about 4 years ago

jhgille2/rna_seq_pipeline_template

WIP reproducible pipeline for rna seq differential expression analysis

10.0 environment.yml

Size: 77.1 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

bwh-bioinformatics-hub/nextflow_demo

Demo of a Nextflow Pipeline for bulk-RNA Seq

10.0 env/environment.yml

Size: 52.7 KB - Last synced: 12 months ago - Pushed: 12 months ago

zhangdongqin/onestep_RNAseq

RNAseq pipeline with shell scripts

9.1 environment.yaml

Size: 2.85 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

zhangdongqin/RNApipe-nf

Easy and quick pipeline for RNAseq analysis

9.1 environment.yaml

Size: 89.8 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago

D-Barradas/Coral_project

10.0.* environment.yml

Size: 438 MB - Last synced: 3 months ago - Pushed: 3 months ago

Jacobog02/Maslenlab_Thesis

Thesis code repository for analysis of Illumina Bisulfite Sequencing data.

8.1.* env/environment.yml

Size: 2.25 MB - Last synced: about 1 year ago - Pushed: over 3 years ago

emaballarin/RDDL

Rapid Deployment Deep Learning

environment.yml

Size: 1.82 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

jiangweiyao/github_action_docker_integration

Repo for testing advanced github action integration with Docker

9.2.* Docker/environment.yml

Size: 11.7 KB - Last synced: 28 days ago - Pushed: 12 months ago

szhan/onekg_analysis

Evaluation of genotype imputation methods using the unified genealogy dataset

10.0 environment.yml

Size: 512 KB - Last synced: 11 months ago - Pushed: 11 months ago

stephenshank/argos-galaxy

10.0 environment.yml

Size: 21.5 KB - Last synced: about 1 month ago - Pushed: 8 months ago

yichunlo/PythonHomework Fork of amjltc295/PythonHomework

Homework project for students to practice Python, Git and GitHub Flow

4.17 environment.yaml

Size: 541 KB - Last synced: 10 months ago - Pushed: over 5 years ago

Arul16psp05/odw-2019 Fork of gw-odw/odw-2019

4.18 environment.yml

Size: 35.5 MB - Last synced: 10 months ago - Pushed: about 4 years ago

PAIN-initiative/nextflow_demo

10.0 env/environment.yml

Size: 14.6 KB - Last synced: 28 days ago - Pushed: 12 months ago

battyone/odw-2020 Fork of gw-odw/odw-2020

Software tutorials for GW Open Data Workshop #3

8.2 environment.yml

Size: 20.4 MB - Last synced: about 1 month ago - Pushed: over 3 years ago

battyone/odw-2018 Fork of gw-odw/odw-2018

Software for Open Data Workshop 2018

4.18 environment.yml

Size: 23 MB - Last synced: about 1 month ago - Pushed: over 4 years ago

battyone/odw-2019 Fork of gw-odw/odw-2019

4.18 environment.yml

Size: 35.5 MB - Last synced: about 1 month ago - Pushed: about 4 years ago

YannisKalaijakis/CameraTraps Fork of microsoft/CameraTraps

Tools for training and running detectors and classifiers for wildlife images collected from motion-triggered cameras.

environment.yml

Size: 166 MB - Last synced: about 1 month ago - Pushed: over 1 year ago

PaulDittrichDT/DHChatBot

10.0 environment.yml

Size: 552 KB - Last synced: 7 months ago - Pushed: 7 months ago

SKKU-SecLab/AdFlush

AdFlush - A powerful ML-based blocker for browser.

10.0 environment.yml

Size: 154 MB - Last synced: 3 months ago - Pushed: 3 months ago

zooniverse/CameraTraps Fork of microsoft/CameraTraps

Tools for training and running detectors and classifiers for wildlife images collected from motion-triggered cameras.

environment.yml

Size: 311 MB - Last synced: about 1 month ago - Pushed: 5 months ago

raphael-group/CalicoST

Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics

10.0 environment.yml

Size: 212 MB - Last synced: 28 days ago - Pushed: 30 days ago

yodaka0/ImageNullRemoveLinux

environment.yml

Size: 347 MB - Last synced: 6 months ago - Pushed: 6 months ago

yodaka0/VideoExtractWin

environment.yml

Size: 43 KB - Last synced: 4 months ago - Pushed: 4 months ago

ESMValGroup/ESMValCore

ESMValCore: A community tool for pre-processing data from Earth system models in CMIP and running analysis scripts.

environment.yml

Size: 134 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

unicorn-23/GwasWA

10.0 environment.yml

Size: 75.5 MB - Last synced: 5 months ago - Pushed: 5 months ago

ArnaudPoletto/cs-498-urban-light-movement-analysis

This repository presents research focusing on the interplay of changing light conditions and movement patterns in urban settings. It contains a wealth of insights into how daylight variability influences urban life and how movement within these spaces unfolds, combining advanced image processing and deep learning techniques.