Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

Package Usage: conda: paml

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/paml

Dependent Repos 11

brucemoran/tumour_only
Tumour-only DNA sequencing analysis
  • 4.9 environment.yaml

Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

kircherlab/CADD-scripts
CADD scripts release for offline scoring. For more information about CADD, please visit our website
  • 4.9 envs/environment.yml

Size: 2.02 MB - Last synced: 11 days ago - Pushed: about 1 month ago

LPCDRP/hybran
Hybrid reference-based and ab initio annotation of prokaryotic genomes https://lpcdrp.gitlab.io/hybran/
  • environment.yml

Last synced: 11 months ago

ctlab/GScour
Genome-wide detection of positive selection
  • 4.9 environment.yml

Size: 1.89 MB - Last synced: 13 days ago - Pushed: 12 months ago

jbloomlab/SARSr-CoV_homolog_survey
Survey of ACE2 binding specificities among SARS-related CoV homologs
  • 4.9 environment.yml

Size: 139 MB - Last synced: 10 months ago - Pushed: about 1 year ago

deconvolute/subgenome
Identification of druggable genes in pathogenic bacteria – subtractive genomics approach
  • 4.9 environment.yml

Size: 10.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

lucanest/Phyloformer
Fast and accurate Phylogeny estimation with self-attention Networks
  • 4.8 environment.yml

Size: 7.45 MB - Last synced: 9 months ago - Pushed: 11 months ago

duncanberger/nxf-BATQual
Bacterial genome assembly, annotation and typing pipeline.
  • 4.9 environment.yaml

Size: 321 KB - Last synced: 10 months ago - Pushed: 10 months ago

liaoherui/StrainAnalyze
StrainAnalyze: a user-friendly bioinformatics pipeline used to analyze given identified bacterial strains in short reads.
  • 4.9 environment.yaml

Size: 14.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

Hajibabaei-Lab/SCVUC_COI_metabarcode_pipeline
Snakemake bioinformatic pipeline to process COI mtDNA metabarcodes
  • 4.9 environment.yml

Size: 352 KB - Last synced: about 1 year ago - Pushed: almost 4 years ago

bfairkun/Comparative_eQTL
Primary data: Chimp eQTLs called from heart tissue samples
  • 4.9 code/snakemake_workflow/envs/environment.yml

Size: 583 MB - Last synced: 10 months ago - Pushed: over 3 years ago

jackkamm/snippy-false-negatives
  • 4.9 environment.yaml

Size: 4.88 KB - Last synced: over 1 year ago - Pushed: over 5 years ago

Arkadiy-Garber/bvcn-binder-pseudofinder
  • environment.yml

Size: 33.5 MB - Last synced: about 1 year ago - Pushed: over 3 years ago

ErasmusMC-Bioinformatics/WeFaceNano
Nanopore plasmid pipeline (FAST5 basecalling, assembly, plasmid identification and antimicrobial resistance genes identification).
  • 4.9 environment.yml

Size: 6.78 MB - Last synced: about 2 months ago - Pushed: about 3 years ago

telatin/sequence-formats
  • 4.9 libraries/perl/environment.yaml

Size: 31.3 KB - Last synced: about 1 year ago - Pushed: over 2 years ago

trongnhanuit/Phyloformer Fork of lucanest/Phyloformer
Fast and accurate Phylogeny estimation with self-attention Networks
  • 4.8 environment.yml

Size: 13.7 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

javaweb2019/datahub Fork of vinitra-zz/datahub
JupyterHubs for use by Berkeley enrolled students
  • 4.9.* deployments/biology/image/environment.yml

Size: 66.6 MB - Last synced: 10 months ago - Pushed: over 3 years ago

shaneknapp/datahub Fork of berkeley-dsep-infra/datahub
JupyterHubs for use by Berkeley enrolled students
  • 4.9.* deployments/biology/image/environment.yml

Size: 71.4 MB - Last synced: 9 days ago - Pushed: 9 days ago

ryanlovett/datahub Fork of berkeley-dsep-infra/datahub
JupyterHubs for use by Berkeley enrolled students
  • 4.9.* deployments/biology/image/environment.yml

Size: 71.5 MB - Last synced: 10 days ago - Pushed: 10 days ago

berkeley-dsep-infra/datahub
JupyterHubs for use by Berkeley enrolled students
  • 4.9.* deployments/biology/image/environment.yml

Size: 71.7 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

rki-mf1/PanAdapt
  • 4.10.6.* environment.yml

Size: 14.8 MB - Last synced: 2 months ago - Pushed: 2 months ago

unicorn-23/GwasWA
  • 4.10.6 environment.yml

Size: 75.5 MB - Last synced: 5 months ago - Pushed: 5 months ago

LPCDRP/hybran
comparative prokaryotic genome annotation
  • environment.yml

Size: 6.68 MB - Last synced: about 5 hours ago - Pushed: about 6 hours ago