Ecosyste.ms: Repos
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Package Usage: conda: vardict-java
View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/vardict-java
Dependent Repos 5
Clinical-Genomics-Lund/SomaticPanelPipeline
- 1.8.2.* container/environment.yml
Size: 5.29 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
luisacusick/VC-Optimus
Bioinformatics pipeline to take short reads, align them to a reference, and call SNPs.- 1.7.0 environment.yml
Size: 138 KB - Last synced: about 1 year ago - Pushed: about 3 years ago
Clinical-Genomics-Lund/nextflow_myeloid
Nextflow pipeline for analysis of the twist myeloid panel- 1.7.0.* container/environment.yml
Size: 4.95 MB - Last synced: 8 months ago - Pushed: about 3 years ago
biowdl/somatic-variantcalling
A pipeline for somatic variantcalling. Category:Single-Sample- 1.5.4 environment.yml
Size: 3.14 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
clinical-genomics-uppsala/Twist_DNA
- 1.8.2.* dockerfiles/somatic/environment.yml
Size: 18.5 MB - Last synced: about 1 year ago - Pushed: over 2 years ago
bjpop/tp53_tamseq
- 1.6.0.* environment.yaml
Size: 4.6 MB - Last synced: about 1 year ago - Pushed: over 4 years ago
TonyKess/germline-DNA
biowdl germline-DNA WDLs, modifying for MS Azure/non-model species- 1.5.4 somatic-variantcalling/environment.yml
Size: 19.6 MB - Last synced: about 1 year ago - Pushed: about 3 years ago
nf-core/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!- 1.8.3.* modules/nf-core/vardictjava/environment.yml
Size: 146 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
nf-cmgg/germline
A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data- 1.8.3.* modules/nf-core/vardictjava/environment.yml
Size: 8.56 MB - Last synced: 15 days ago - Pushed: 16 days ago