Ecosyste.ms: Repos

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Package Usage: conda: vardict-java

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/vardict-java

Dependent Repos 5

Clinical-Genomics-Lund/SomaticPanelPipeline
  • 1.8.2.* container/environment.yml

Size: 5.29 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

luisacusick/VC-Optimus
Bioinformatics pipeline to take short reads, align them to a reference, and call SNPs.
  • 1.7.0 environment.yml

Size: 138 KB - Last synced: about 1 year ago - Pushed: about 3 years ago

Clinical-Genomics-Lund/nextflow_myeloid
Nextflow pipeline for analysis of the twist myeloid panel
  • 1.7.0.* container/environment.yml

Size: 4.95 MB - Last synced: 8 months ago - Pushed: about 3 years ago

biowdl/somatic-variantcalling
A pipeline for somatic variantcalling. Category:Single-Sample
  • 1.5.4 environment.yml

Size: 3.14 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago

clinical-genomics-uppsala/Twist_DNA
  • 1.8.2.* dockerfiles/somatic/environment.yml

Size: 18.5 MB - Last synced: about 1 year ago - Pushed: over 2 years ago

bjpop/tp53_tamseq
  • 1.6.0.* environment.yaml

Size: 4.6 MB - Last synced: about 1 year ago - Pushed: over 4 years ago

TonyKess/germline-DNA
biowdl germline-DNA WDLs, modifying for MS Azure/non-model species
  • 1.5.4 somatic-variantcalling/environment.yml

Size: 19.6 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

nf-core/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
  • 1.8.3.* modules/nf-core/vardictjava/environment.yml

Size: 146 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

nf-cmgg/germline
A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data
  • 1.8.3.* modules/nf-core/vardictjava/environment.yml

Size: 8.56 MB - Last synced: 15 days ago - Pushed: 16 days ago