Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

Package Usage: cran: princurve

Fit a Principal Curve in Arbitrary Dimension
24 versions
Latest release: over 3 years ago
10 dependent packages
2,388 downloads last month

View more package details: https://packages.ecosyste.ms/registries/cran.r-project.org/packages/princurve

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/rcannood%2Fprincurve

Dependent Repos 23

krisspnet/pathifier
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/pathifier.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=pathifier.
  • * DESCRIPTION

Size: 1.79 MB - Last synced: 7 months ago - Pushed: about 7 years ago

statOmics/tradeSeq
TRAjectory-based Differential Expression analysis for SEQuencing data
  • * DESCRIPTION

Size: 61.2 MB - Last synced: 26 days ago - Pushed: 6 months ago

rseng/rsepedia-analysis
Exploring clustering of research software encyclopedia entries
  • * _repos/github/dgrun/FateID/DESCRIPTION

Size: 435 MB - Last synced: 15 days ago - Pushed: 16 days ago

bioconductor/aroma.light
  • >= 2.1.4 DESCRIPTION

Size: 968 KB - Last synced: about 1 year ago

HenrikBengtsson/aroma.light
🔬 R package: This is the Bioconductor devel version of the aroma.light package.
  • >= 2.1.4 DESCRIPTION

Size: 1.17 MB - Last synced: 20 days ago - Pushed: 11 months ago

Cristianetaniguti/onemap Fork of augusto-garcia/onemap
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
  • * DESCRIPTION

Size: 130 MB - Last synced: 1 day ago - Pushed: 2 days ago

bioconductor/affxparser
  • >= 2.1.4 DESCRIPTION

Size: 968 KB - Last synced: about 1 year ago

lanagarmire/lilikoi2
  • * DESCRIPTION

Size: 5.74 MB - Last synced: 3 months ago - Pushed: over 2 years ago

Liuy12/MBDDiff
  • * DESCRIPTION

Size: 1.09 MB - Last synced: 3 months ago - Pushed: almost 8 years ago

rcannood/SCORPIUS
Linear trajectory inference for single-cell RNA-seq
  • >= 2.1.4 DESCRIPTION

Size: 72.4 MB - Last synced: 2 days ago - Pushed: about 1 month ago

mmollina/MAPpoly
Genetic maps in autopolyploids
  • * DESCRIPTION

Size: 381 MB - Last synced: 23 days ago - Pushed: 3 months ago

cran/RSDA
:exclamation: This is a read-only mirror of the CRAN R package repository. RSDA — R to Symbolic Data Analysis. Homepage: https://oldemarrodriguez.com/
  • * DESCRIPTION

Size: 7.4 MB - Last synced: 7 months ago - Pushed: 7 months ago

cran/analogue
:exclamation: This is a read-only mirror of the CRAN R package repository. analogue — Analogue and Weighted Averaging Methods for Palaeoecology. Homepage: https://github.com/gavinsimpson/analogue Report bugs for this package: https://github.com/gavinsimpson/analogue/issues
  • >=2.0.2 DESCRIPTION

Size: 5.69 MB - Last synced: 10 months ago - Pushed: almost 3 years ago

cran/onemap
:exclamation: This is a read-only mirror of the CRAN R package repository. onemap — Construction of Genetic Maps in Experimental Crosses. Homepage: https://github.com/augusto-garcia/onemap Report bugs for this package: https://github.com/augusto-garcia/onemap/wiki
  • * DESCRIPTION

Size: 6.23 MB - Last synced: 10 months ago - Pushed: over 1 year ago

kieranrcampbell/embeddr
This repository is retired software
  • * DESCRIPTION

Size: 21 MB - Last synced: 3 months ago - Pushed: over 8 years ago

HenrikBengtsson/aroma.light-BioC_release
R package: This is the Bioconductor release version of the aroma.light package. It's synchronized via the Bioconductor Git-SVN bridge. This is effectively only a READ-ONLY repository. For bug reports, pull requests and so on, please use the https://github.com/HenrikBengtsson/aroma.light GitHub repository
  • >= 1.1 DESCRIPTION

Size: 969 KB - Last synced: 21 days ago - Pushed: about 9 years ago

QiChen2014/embeddr Fork of kieranrcampbell/embeddr
Pseudotemporal ordering of single-cell RNA-seq data using laplacian eigenmaps & principal curves
  • * DESCRIPTION

Size: 21 MB - Last synced: over 1 year ago - Pushed: over 8 years ago

r-forge/analogue
Read-only mirror of "analogue" from r-forge SVN.
  • * pkg/DESCRIPTION

Size: 2.99 MB - Last synced: 10 months ago - Pushed: over 2 years ago

ZhuMSLab/MetDNA
All the source code of MetDNA.
  • * DESCRIPTION

Size: 40.9 MB - Last synced: 7 months ago - Pushed: about 2 years ago

gavinsimpson/analogue
Analogue and weighted averaging methods for palaeoecology
  • >= 2.0.2 DESCRIPTION

Size: 4.53 MB - Last synced: about 1 month ago - Pushed: about 1 year ago

vertesy/Seurat.utils
Various utility functions for Seurat single-cell analysis
  • * DESCRIPTION

Size: 3.74 MB - Last synced: 1 day ago - Pushed: 2 days ago

kstreet13/slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.
  • >= 2.0.4 DESCRIPTION

Size: 260 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

dgrun/RaceID3_StemID2_package
Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and StemID2 method including novel functionalities and performance improvements compared to the previous RaceID3/StemID2 version in the RaceID3_StemID2 repository. The RaceID3_StemID2 repository will not be updated anymore in the future.
  • * DESCRIPTION

Size: 38.7 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

edroaldo/fusca
Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it contains two modules: 1) CellRouter, for reconstruction of complex single-cell trajectories, and 2) CellComm, to infer intercellular communication networks from scRNA-seq data.
  • * DESCRIPTION

Size: 22.4 MB - Last synced: 4 months ago - Pushed: over 1 year ago

gabrluiz/fusca Fork of edroaldo/fusca
Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it contains two modules: 1) CellRouter, for reconstruction of complex single-cell trajectories, and 2) CellComm, to infer intercellular communication networks from scRNA-seq data.
  • * DESCRIPTION

Size: 22.4 MB - Last synced: over 1 year ago - Pushed: over 1 year ago

cran/MDSMap
:exclamation: This is a read-only mirror of the CRAN R package repository. MDSMap — High Density Genetic Linkage Mapping using Multidimensional Scaling
  • >= 2.1.2 DESCRIPTION

Size: 691 KB - Last synced: 7 months ago - Pushed: almost 6 years ago

lanagarmire/lilikoi
  • * DESCRIPTION

Size: 5.77 MB - Last synced: 6 months ago - Pushed: over 5 years ago

dynverse/ti_slingshot
  • * package/DESCRIPTION

Size: 10.2 MB - Last synced: about 1 year ago - Pushed: over 2 years ago

cran/RaceID
:exclamation: This is a read-only mirror of the CRAN R package repository. RaceID — Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data
  • * DESCRIPTION

Size: 26.4 MB - Last synced: 5 months ago - Pushed: 5 months ago

cran/mappoly
:exclamation: This is a read-only mirror of the CRAN R package repository. mappoly — Genetic Linkage Maps in Autopolyploids. Homepage: https://github.com/mmollina/MAPpoly Report bugs for this package: https://github.com/mmollina/MAPpoly/issues
  • * DESCRIPTION

Size: 8.01 MB - Last synced: 3 months ago - Pushed: 3 months ago

ISAAKiel/quantAAR
R Package - Quantitative Analysis in Archaeology
  • >= 2.1.3 DESCRIPTION

Size: 2.54 MB - Last synced: 10 months ago - Pushed: almost 4 years ago

cran/FateID
:exclamation: This is a read-only mirror of the CRAN R package repository. FateID — Quantification of Fate Bias in Multipotent Progenitors
  • * DESCRIPTION

Size: 16 MB - Last synced: 10 months ago - Pushed: almost 2 years ago

cran/lilikoi
:exclamation: This is a read-only mirror of the CRAN R package repository. lilikoi — Metabolomics Personalized Pathway Analysis Tool
  • * DESCRIPTION

Size: 3.65 MB - Last synced: 10 months ago - Pushed: over 1 year ago

kmfrick/Rpcop
R package to compute principal curves on oriented points
  • * pkg/DESCRIPTION

Size: 165 KB - Last synced: 11 months ago - Pushed: 11 months ago

BiomathematicsAndStatisticsScotland/MDSMap
MDSMap R package
  • * MDSMap/DESCRIPTION

Size: 703 KB - Last synced: 4 months ago - Pushed: 8 months ago

jhu-statprogramming-fall-2022/biostat840-project3-pkgdown-rafaeldossantospeixoto
biostat840-project3-pkgdown-rafaeldossantospeixoto created by GitHub Classroom
  • * DESCRIPTION

Size: 26.8 MB - Last synced: 4 months ago - Pushed: over 1 year ago

lingxuez/SOUPR
SOUP, for Semi-sOft clUstering with Pure cells.
  • * DESCRIPTION

Size: 17.3 MB - Last synced: 11 months ago - Pushed: over 5 years ago

ISAAKiel/quantAAR
R Package - Quantitative Analysis in Archaeology
  • >= 2.1.3 DESCRIPTION

Last synced: over 1 year ago

tpbilton/GUSMap
Genotyping Uncertainty with Sequencing data and linkage MAPping
  • >= 2.0 DESCRIPTION

Size: 18.2 MB - Last synced: 3 months ago - Pushed: 3 months ago

ashley-brooke/BiocWorkshops Fork of Bioconductor/BiocWorkshops
:warning: 2018 :warning: Bioconductor Workshops
  • * DESCRIPTION

Size: 137 MB - Last synced: 11 months ago - Pushed: about 5 years ago

TSun-tech/slingshot Fork of kstreet13/slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.
  • >= 2.0.4 DESCRIPTION

Size: 260 MB - Last synced: about 1 month ago - Pushed: almost 4 years ago

hchetia/tradeSeq Fork of statOmics/tradeSeq
TRAjectory-based Differential Expression analysis for SEQuencing data
  • * DESCRIPTION

Size: 61.6 MB - Last synced: 11 months ago - Pushed: almost 2 years ago

pageneck/lilikoi2 Fork of lanagarmire/lilikoi2
  • * DESCRIPTION

Size: 5.74 MB - Last synced: 10 months ago - Pushed: over 2 years ago

Andelyu/slingshot Fork of kstreet13/slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.
  • >= 2.0.4 DESCRIPTION

Size: 261 MB - Last synced: 10 months ago - Pushed: almost 3 years ago

gcaifer/onemap Fork of Cristianetaniguti/onemap
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses
  • * DESCRIPTION

Size: 130 MB - Last synced: 9 months ago - Pushed: 11 months ago

jasonserviss/ClusterSignificance
  • >= 2.0.5 DESCRIPTION

Size: 874 KB - Last synced: 10 days ago - Pushed: over 5 years ago

JING-XINXING/slingshot Fork of kstreet13/slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.
  • >= 2.0.4 DESCRIPTION

Size: 261 MB - Last synced: 9 months ago - Pushed: almost 3 years ago

maomlab/MPStats
Morphological Profiling Statistical Analysis
  • >= 2.1.4 DESCRIPTION

Size: 2.08 MB - Last synced: 8 months ago - Pushed: 8 months ago

yuhenglai/my_dyngen
  • * DESCRIPTION

Size: 246 KB - Last synced: 7 months ago - Pushed: 7 months ago

hb-slash/bioc-aroma.light-help
  • >= 1.1 DESCRIPTION

Size: 772 KB - Last synced: 5 months ago - Pushed: about 7 years ago

mmollina/mappoly2
Genetic Linkage Maps in Autopolyploids v 2.0
  • * DESCRIPTION

Size: 28.8 MB - Last synced: 9 days ago - Pushed: 9 days ago

tianlt/dbcti
Cell Trajectory Inference
  • * DESCRIPTION

Size: 146 KB - Last synced: 2 months ago - Pushed: 2 months ago