Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
Package Usage: cran: princurve
Fit a Principal Curve in Arbitrary Dimension
24 versions
Latest release: over 3 years ago
10 dependent packages
2,388 downloads last month
View more package details: https://packages.ecosyste.ms/registries/cran.r-project.org/packages/princurve
View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/rcannood%2Fprincurve
Dependent Repos 23
krisspnet/pathifier
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/pathifier.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=pathifier.- * DESCRIPTION
Size: 1.79 MB - Last synced: 7 months ago - Pushed: about 7 years ago
statOmics/tradeSeq
TRAjectory-based Differential Expression analysis for SEQuencing data- * DESCRIPTION
Size: 61.2 MB - Last synced: 26 days ago - Pushed: 6 months ago
rseng/rsepedia-analysis
Exploring clustering of research software encyclopedia entries- * _repos/github/dgrun/FateID/DESCRIPTION
Size: 435 MB - Last synced: 15 days ago - Pushed: 16 days ago
HenrikBengtsson/aroma.light
🔬 R package: This is the Bioconductor devel version of the aroma.light package.- >= 2.1.4 DESCRIPTION
Size: 1.17 MB - Last synced: 20 days ago - Pushed: 11 months ago
Cristianetaniguti/onemap Fork of augusto-garcia/onemap
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses- * DESCRIPTION
Size: 130 MB - Last synced: 1 day ago - Pushed: 2 days ago
lanagarmire/lilikoi2
- * DESCRIPTION
Size: 5.74 MB - Last synced: 3 months ago - Pushed: over 2 years ago
rcannood/SCORPIUS
Linear trajectory inference for single-cell RNA-seq- >= 2.1.4 DESCRIPTION
Size: 72.4 MB - Last synced: 2 days ago - Pushed: about 1 month ago
mmollina/MAPpoly
Genetic maps in autopolyploids- * DESCRIPTION
Size: 381 MB - Last synced: 23 days ago - Pushed: 3 months ago
cran/RSDA
:exclamation: This is a read-only mirror of the CRAN R package repository. RSDA — R to Symbolic Data Analysis. Homepage: https://oldemarrodriguez.com/- * DESCRIPTION
Size: 7.4 MB - Last synced: 7 months ago - Pushed: 7 months ago
cran/analogue
:exclamation: This is a read-only mirror of the CRAN R package repository. analogue — Analogue and Weighted Averaging Methods for Palaeoecology. Homepage: https://github.com/gavinsimpson/analogue Report bugs for this package: https://github.com/gavinsimpson/analogue/issues- >=2.0.2 DESCRIPTION
Size: 5.69 MB - Last synced: 10 months ago - Pushed: almost 3 years ago
cran/onemap
:exclamation: This is a read-only mirror of the CRAN R package repository. onemap — Construction of Genetic Maps in Experimental Crosses. Homepage: https://github.com/augusto-garcia/onemap Report bugs for this package: https://github.com/augusto-garcia/onemap/wiki- * DESCRIPTION
Size: 6.23 MB - Last synced: 10 months ago - Pushed: over 1 year ago
kieranrcampbell/embeddr
This repository is retired software- * DESCRIPTION
Size: 21 MB - Last synced: 3 months ago - Pushed: over 8 years ago
HenrikBengtsson/aroma.light-BioC_release
R package: This is the Bioconductor release version of the aroma.light package. It's synchronized via the Bioconductor Git-SVN bridge. This is effectively only a READ-ONLY repository. For bug reports, pull requests and so on, please use the https://github.com/HenrikBengtsson/aroma.light GitHub repository- >= 1.1 DESCRIPTION
Size: 969 KB - Last synced: 21 days ago - Pushed: about 9 years ago
QiChen2014/embeddr Fork of kieranrcampbell/embeddr
Pseudotemporal ordering of single-cell RNA-seq data using laplacian eigenmaps & principal curves- * DESCRIPTION
Size: 21 MB - Last synced: over 1 year ago - Pushed: over 8 years ago
r-forge/analogue
Read-only mirror of "analogue" from r-forge SVN.- * pkg/DESCRIPTION
Size: 2.99 MB - Last synced: 10 months ago - Pushed: over 2 years ago
ZhuMSLab/MetDNA
All the source code of MetDNA.- * DESCRIPTION
Size: 40.9 MB - Last synced: 7 months ago - Pushed: about 2 years ago
gavinsimpson/analogue
Analogue and weighted averaging methods for palaeoecology- >= 2.0.2 DESCRIPTION
Size: 4.53 MB - Last synced: about 1 month ago - Pushed: about 1 year ago
vertesy/Seurat.utils
Various utility functions for Seurat single-cell analysis- * DESCRIPTION
Size: 3.74 MB - Last synced: 1 day ago - Pushed: 2 days ago
kstreet13/slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.- >= 2.0.4 DESCRIPTION
Size: 260 MB - Last synced: about 1 month ago - Pushed: about 1 month ago
dgrun/RaceID3_StemID2_package
Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and StemID2 method including novel functionalities and performance improvements compared to the previous RaceID3/StemID2 version in the RaceID3_StemID2 repository. The RaceID3_StemID2 repository will not be updated anymore in the future.- * DESCRIPTION
Size: 38.7 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
edroaldo/fusca
Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it contains two modules: 1) CellRouter, for reconstruction of complex single-cell trajectories, and 2) CellComm, to infer intercellular communication networks from scRNA-seq data.- * DESCRIPTION
Size: 22.4 MB - Last synced: 4 months ago - Pushed: over 1 year ago
gabrluiz/fusca Fork of edroaldo/fusca
Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it contains two modules: 1) CellRouter, for reconstruction of complex single-cell trajectories, and 2) CellComm, to infer intercellular communication networks from scRNA-seq data.- * DESCRIPTION
Size: 22.4 MB - Last synced: over 1 year ago - Pushed: over 1 year ago
cran/MDSMap
:exclamation: This is a read-only mirror of the CRAN R package repository. MDSMap — High Density Genetic Linkage Mapping using Multidimensional Scaling- >= 2.1.2 DESCRIPTION
Size: 691 KB - Last synced: 7 months ago - Pushed: almost 6 years ago
lanagarmire/lilikoi
- * DESCRIPTION
Size: 5.77 MB - Last synced: 6 months ago - Pushed: over 5 years ago
dynverse/ti_slingshot
- * package/DESCRIPTION
Size: 10.2 MB - Last synced: about 1 year ago - Pushed: over 2 years ago
cran/RaceID
:exclamation: This is a read-only mirror of the CRAN R package repository. RaceID — Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data- * DESCRIPTION
Size: 26.4 MB - Last synced: 5 months ago - Pushed: 5 months ago
cran/mappoly
:exclamation: This is a read-only mirror of the CRAN R package repository. mappoly — Genetic Linkage Maps in Autopolyploids. Homepage: https://github.com/mmollina/MAPpoly Report bugs for this package: https://github.com/mmollina/MAPpoly/issues- * DESCRIPTION
Size: 8.01 MB - Last synced: 3 months ago - Pushed: 3 months ago
ISAAKiel/quantAAR
R Package - Quantitative Analysis in Archaeology- >= 2.1.3 DESCRIPTION
Size: 2.54 MB - Last synced: 10 months ago - Pushed: almost 4 years ago
cran/FateID
:exclamation: This is a read-only mirror of the CRAN R package repository. FateID — Quantification of Fate Bias in Multipotent Progenitors- * DESCRIPTION
Size: 16 MB - Last synced: 10 months ago - Pushed: almost 2 years ago
cran/lilikoi
:exclamation: This is a read-only mirror of the CRAN R package repository. lilikoi — Metabolomics Personalized Pathway Analysis Tool- * DESCRIPTION
Size: 3.65 MB - Last synced: 10 months ago - Pushed: over 1 year ago
kmfrick/Rpcop
R package to compute principal curves on oriented points- * pkg/DESCRIPTION
Size: 165 KB - Last synced: 11 months ago - Pushed: 11 months ago
BiomathematicsAndStatisticsScotland/MDSMap
MDSMap R package- * MDSMap/DESCRIPTION
Size: 703 KB - Last synced: 4 months ago - Pushed: 8 months ago
jhu-statprogramming-fall-2022/biostat840-project3-pkgdown-rafaeldossantospeixoto
biostat840-project3-pkgdown-rafaeldossantospeixoto created by GitHub Classroom- * DESCRIPTION
Size: 26.8 MB - Last synced: 4 months ago - Pushed: over 1 year ago
lingxuez/SOUPR
SOUP, for Semi-sOft clUstering with Pure cells.- * DESCRIPTION
Size: 17.3 MB - Last synced: 11 months ago - Pushed: over 5 years ago
ISAAKiel/quantAAR
R Package - Quantitative Analysis in Archaeology- >= 2.1.3 DESCRIPTION
Last synced: over 1 year ago
tpbilton/GUSMap
Genotyping Uncertainty with Sequencing data and linkage MAPping- >= 2.0 DESCRIPTION
Size: 18.2 MB - Last synced: 3 months ago - Pushed: 3 months ago
ashley-brooke/BiocWorkshops Fork of Bioconductor/BiocWorkshops
:warning: 2018 :warning: Bioconductor Workshops- * DESCRIPTION
Size: 137 MB - Last synced: 11 months ago - Pushed: about 5 years ago
TSun-tech/slingshot Fork of kstreet13/slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.- >= 2.0.4 DESCRIPTION
Size: 260 MB - Last synced: about 1 month ago - Pushed: almost 4 years ago
hchetia/tradeSeq Fork of statOmics/tradeSeq
TRAjectory-based Differential Expression analysis for SEQuencing data- * DESCRIPTION
Size: 61.6 MB - Last synced: 11 months ago - Pushed: almost 2 years ago
pageneck/lilikoi2 Fork of lanagarmire/lilikoi2
- * DESCRIPTION
Size: 5.74 MB - Last synced: 10 months ago - Pushed: over 2 years ago
Andelyu/slingshot Fork of kstreet13/slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.- >= 2.0.4 DESCRIPTION
Size: 261 MB - Last synced: 10 months ago - Pushed: almost 3 years ago
gcaifer/onemap Fork of Cristianetaniguti/onemap
Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses- * DESCRIPTION
Size: 130 MB - Last synced: 9 months ago - Pushed: 11 months ago
jasonserviss/ClusterSignificance
- >= 2.0.5 DESCRIPTION
Size: 874 KB - Last synced: 10 days ago - Pushed: over 5 years ago
JING-XINXING/slingshot Fork of kstreet13/slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.- >= 2.0.4 DESCRIPTION
Size: 261 MB - Last synced: 9 months ago - Pushed: almost 3 years ago
maomlab/MPStats
Morphological Profiling Statistical Analysis- >= 2.1.4 DESCRIPTION
Size: 2.08 MB - Last synced: 8 months ago - Pushed: 8 months ago
hb-slash/bioc-aroma.light-help
- >= 1.1 DESCRIPTION
Size: 772 KB - Last synced: 5 months ago - Pushed: about 7 years ago
mmollina/mappoly2
Genetic Linkage Maps in Autopolyploids v 2.0- * DESCRIPTION
Size: 28.8 MB - Last synced: 9 days ago - Pushed: 9 days ago
tianlt/dbcti
Cell Trajectory Inference- * DESCRIPTION
Size: 146 KB - Last synced: 2 months ago - Pushed: 2 months ago