Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

Package Usage: cran: seriation

Infrastructure for Ordering Objects Using Seriation
48 versions
Latest release: 5 months ago
28 dependent packages

View more package details: https://packages.ecosyste.ms/registries/cran.r-project.org/packages/seriation

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/mhahsler%2Fseriation

Dependent Repos 78

r4ds/bookclub-ggplot2
ggplot2 Book Club
  • * DESCRIPTION

Size: 143 MB - Last synced: 24 days ago - Pushed: about 1 month ago

hadley/ggplot2-book
ggplot2: elegant graphics for data analysis
  • * DESCRIPTION

Size: 49.2 MB - Last synced: 5 days ago - Pushed: 12 days ago

MonashBioinformaticsPlatform/varistran
R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data
  • * DESCRIPTION

Size: 1010 KB - Last synced: 7 months ago - Pushed: about 4 years ago

rseng/rsepedia-analysis
Exploring clustering of research software encyclopedia entries
  • * _repos/github/david-barnett/microViz/DESCRIPTION

Size: 433 MB - Last synced: 5 days ago - Pushed: 7 days ago

jpquast/protti
Picotti lab data analysis package.
  • * DESCRIPTION

Size: 37.6 MB - Last synced: 3 days ago - Pushed: 3 days ago

trinker/CAseriation
Package for contingency table seriation by means of Correspondence Analysis
  • * DESCRIPTION

Size: 57.6 KB - Last synced: about 1 year ago - Pushed: over 9 years ago

JVAdams/jvamisc
Miscellaneous utility functions (R package).
  • * DESCRIPTION

Size: 100 MB - Last synced: 9 months ago - Pushed: almost 3 years ago

talgalili/dendextend
Extending R's Dendrogram Functionality
  • * DESCRIPTION

Size: 59.1 MB - Last synced: 5 days ago - Pushed: 5 months ago

wenbostar/metaX
metaX: a flexible and comprehensive software for processing omics data.
  • * DESCRIPTION

Size: 51.2 MB - Last synced: 9 months ago - Pushed: 11 months ago

tidymodels/corrr
Explore correlations in R
  • >= 1.2 DESCRIPTION

Size: 77.5 MB - Last synced: 5 days ago - Pushed: 4 months ago

knime/knime-r
KNIME Interactive R Statistics Integration
  • * org.knime.ext.r3.bin.win32.x86/R-Inst/library/arulesViz/DESCRIPTION
  • * org.knime.ext.r3.bin.win32.x86/R-Inst/library/corrgram/DESCRIPTION

Size: 228 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

thomasp85/ggraph
Grammar of Graph Graphics
  • * DESCRIPTION

Size: 432 MB - Last synced: 14 days ago - Pushed: 2 months ago

jendelman/MapRtools
Tools for genetic mapping
  • * DESCRIPTION

Size: 1.12 MB - Last synced: 5 months ago - Pushed: 5 months ago

mhahsler/arulesViz
Visualizing Association Rules and Frequent Itemsets with R
  • * DESCRIPTION

Size: 31 MB - Last synced: 8 days ago - Pushed: 12 days ago

mikldk/disclapmix
Discrete Laplace Mixture Inference using the EM Algorithm
  • * DESCRIPTION

Size: 1.55 MB - Last synced: about 1 month ago - Pushed: 9 months ago

bryanhanson/ChemoSpec
R functions for the chemometric analysis of spectra
  • * DESCRIPTION

Size: 288 MB - Last synced: 2 days ago - Pushed: 3 months ago

cran/flexclust
:exclamation: This is a read-only mirror of the CRAN R package repository. flexclust — Flexible Cluster Algorithms
  • * DESCRIPTION

Size: 329 KB - Last synced: 10 days ago - Pushed: 10 days ago

r-pkg-team/r-cran-corrplot
Debian packaging of CRAN package corrplot (https://cran.r-project.org/web/packages/corrplot/)
  • * DESCRIPTION

Last synced: over 1 year ago

r-pkg-team/r-cran-heatmaply
GNU R interactive cluster heat maps using 'plotly'
  • * DESCRIPTION

Last synced: over 1 year ago

cran/dendsort
:exclamation: This is a read-only mirror of the CRAN R package repository. dendsort — Modular Leaf Ordering Methods for Dendrogram Nodes. Homepage: https://github.com/evanbiederstedt/dendsort Report bugs for this package: https://github.com/evanbiederstedt/dendsort/issues
  • * DESCRIPTION

Size: 2.27 MB - Last synced: 9 months ago - Pushed: about 3 years ago

pawanjangra1198/r
  • * x86_64-pc-linux-gnu-library/4.1/corrplot/DESCRIPTION

Last synced: 12 months ago

trangdata/treeheatr
Heatmap-integrated Decision Tree Visualizations
  • * DESCRIPTION

Size: 41.6 MB - Last synced: 4 days ago - Pushed: 10 months ago

grafab/pergola
  • * DESCRIPTION

Size: 1.48 MB - Last synced: 6 months ago - Pushed: almost 8 years ago

kwstat/corrgram
Correlograms
  • * DESCRIPTION

Size: 3.22 MB - Last synced: 6 days ago - Pushed: 3 months ago

evanbiederstedt/dendsort
dendsort: Modular Leaf Ordering Methods for Dendrogram Nodes
  • * DESCRIPTION

Size: 6.22 MB - Last synced: 17 days ago - Pushed: almost 3 years ago

talgalili/heatmaply
Interactive Heat Maps for R Using plotly
  • * DESCRIPTION

Size: 6.36 MB - Last synced: 5 days ago - Pushed: 12 days ago

JohnReid/DeLorean
R package to model time series accounting for noise in the temporal dimension. Specifically designed for single cell transcriptome experiments.
  • * DESCRIPTION

Size: 45.7 MB - Last synced: about 1 year ago - Pushed: over 2 years ago

r-pkg-team/r-cran-tidygraph
GNU R tidy API for graph manipulation
  • * DESCRIPTION

Last synced: about 1 year ago

r-pkg-team/r-cran-ggraph
GNU R implementation of grammar of graphics for graphs and networks
  • * DESCRIPTION

Last synced: about 1 year ago

r-pkg-team/r-cran-dendextend
Extending 'dendrogram' Functionality in GNU R
  • * DESCRIPTION

Last synced: 11 months ago

r-pkg-team/r-cran-dendsort
GNU R Modular Leaf Ordering Methods for Dendrogram Nodes
  • * DESCRIPTION

Last synced: about 1 year ago

grasshoppermouse/hagenutils
  • * DESCRIPTION

Size: 2.05 MB - Last synced: 18 days ago - Pushed: 19 days ago

bahlolab/AmpSeqR
Multi-locus Sequence Type Identificatino from Multiplexed Amplicon Deep Sequencing
  • * DESCRIPTION

Size: 16.8 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

r-pkg-team/r-cran-flexclust
Flexible Cluster Algorithms
  • * DESCRIPTION

Last synced: about 1 year ago

andreasleha/heatmap2colden
plotting heatmaps with colored dendrograms
  • * DESCRIPTION

Size: 113 KB - Last synced: about 1 year ago - Pushed: over 11 years ago

r-pkg-team/r-bioc-netsam
  • >= 1.0 DESCRIPTION

Last synced: over 1 year ago

cran/arulesViz
:exclamation: This is a read-only mirror of the CRAN R package repository. arulesViz — Visualizing Association Rules and Frequent Itemsets. Homepage: https://github.com/mhahsler/arulesViz Report bugs for this package: https://github.com/mhahsler/arulesViz/issues
  • * DESCRIPTION

Size: 9.84 MB - Last synced: 11 days ago - Pushed: 11 days ago

cran/matie
:exclamation: This is a read-only mirror of the CRAN R package repository. matie — Measuring Association and Testing Independence Efficiently
  • * DESCRIPTION

Size: 176 KB - Last synced: 9 months ago - Pushed: about 10 years ago

Xinming9606/intro-ggplot2-cn
  • * DESCRIPTION

Size: 7.7 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

r-forge/corrplot
Read-only mirror of "corrplot" from r-forge SVN.
  • * pkg/corrplot/DESCRIPTION

Size: 396 KB - Last synced: 9 months ago - Pushed: about 2 years ago

cran/corrplot
:exclamation: This is a read-only mirror of the CRAN R package repository. corrplot — Visualization of a Correlation Matrix. Homepage: https://github.com/taiyun/corrplot Report bugs for this package: https://github.com/taiyun/corrplot/issues
  • * DESCRIPTION

Size: 33.8 MB - Last synced: 9 months ago - Pushed: over 2 years ago

rhondabacher/methylscaper
  • * DESCRIPTION

Size: 12 MB - Last synced: 6 months ago - Pushed: 9 months ago

plger/sechm
Wrapper around ComplexHeatmap for SummarizedExperiment objects
  • * DESCRIPTION

Size: 257 KB - Last synced: about 2 months ago - Pushed: 6 months ago

crtahlin/plotTests
Plot of medical data test results.
  • * DESCRIPTION

Size: 3 MB - Last synced: 11 months ago - Pushed: about 9 years ago

cysouw/qlcVisualize
Visualization for Quantitative Language Comparison
  • * DESCRIPTION

Size: 131 KB - Last synced: 24 days ago - Pushed: over 2 years ago

momeara/mema
  • * DESCRIPTION

Size: 79.1 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

taiyun/corrplot
A visual exploratory tool on correlation matrix
  • * DESCRIPTION

Size: 32.8 MB - Last synced: 5 days ago - Pushed: 8 days ago

Victorian-Bioinformatics-Consortium/nesoni
High throughput sequencing analysis tools
  • * nesoni/nesoni-r/DESCRIPTION

Size: 3.14 MB - Last synced: about 1 month ago - Pushed: over 1 year ago

behuang/mpMap
R/mpMap source code
  • * DESCRIPTION

Size: 1.56 MB - Last synced: 7 months ago - Pushed: over 6 years ago

cran/DendSer
:exclamation: This is a read-only mirror of the CRAN R package repository. DendSer — Dendrogram Seriation: Ordering for Visualisation
  • * DESCRIPTION

Size: 18.6 KB - Last synced: 7 months ago - Pushed: about 1 year ago

rohan-shah/mpMapInteractive
Interactive marker ordering code for the mpMap package
  • * DESCRIPTION

Size: 493 KB - Last synced: 7 months ago - Pushed: over 6 years ago

cran/corrgram
:exclamation: This is a read-only mirror of the CRAN R package repository. corrgram — Plot a Correlogram. Homepage: https://kwstat.github.io/corrgram/ Report bugs for this package: https://github.com/kwstat/corrgram/issues/
  • * DESCRIPTION

Size: 2.2 MB - Last synced: 7 months ago - Pushed: about 3 years ago

KNIME/knime-r
  • * org.knime.ext.r3.bin.win32.x86/R-Inst/library/arulesViz/DESCRIPTION
  • * org.knime.ext.r3.bin.win32.x86/R-Inst/library/corrgram/DESCRIPTION

Size: 241 MB - Last synced: over 1 year ago

cran/relations
:exclamation: This is a read-only mirror of the CRAN R package repository. relations — Data Structures and Algorithms for Relations
  • * DESCRIPTION

Size: 3.96 MB - Last synced: 9 months ago - Pushed: about 1 year ago

crtahlin/medplot
Functions for drawing graphs in R visualizing medical information.
  • * DESCRIPTION

Size: 5.17 MB - Last synced: 7 months ago - Pushed: over 8 years ago

r-forge/delmap
Read-only mirror of "delmap" from r-forge SVN.
  • * RcppExample/pkg/DESCRIPTION
  • * pkg/DESCRIPTION

Size: 419 KB - Last synced: 9 months ago - Pushed: about 2 years ago

cran/dendextend
:exclamation: This is a read-only mirror of the CRAN R package repository. dendextend — Extending 'dendrogram' Functionality in R. Homepage: http://talgalili.github.io/dendextend/, https://github.com/talgalili/dendextend/, https://cran.r-project.org/package=dendextend, https://www.r-statistics.com/tag/dendextend/, htt ...
  • * DESCRIPTION

Size: 28.2 MB - Last synced: 7 months ago - Pushed: about 1 year ago

eb-margolis-neuroscience-lab/meap
  • * meapr/DESCRIPTION

Size: 1.66 MB - Last synced: 15 days ago - Pushed: 15 days ago

cran/mpMap
:exclamation: This is a read-only mirror of the CRAN R package repository. mpMap — Multi-parent RIL genetic analysis
  • * DESCRIPTION

Size: 242 KB - Last synced: 7 months ago - Pushed: about 10 years ago

cran/disclapmix
:exclamation: This is a read-only mirror of the CRAN R package repository. disclapmix — Discrete Laplace Mixture Inference using the EM Algorithm. Homepage: http://dx.doi.org/10.1016/j.jtbi.2013.03.009 https://arxiv.org/abs/1304.2129 Report bugs for this package: https://github.com/mikldk/disclapmix/issues
  • * DESCRIPTION

Size: 493 KB - Last synced: 9 months ago - Pushed: almost 2 years ago

bwrc/semigeom-r
Semigeometric Tiling of Event Sequences
  • * DESCRIPTION

Size: 41 KB - Last synced: about 2 months ago - Pushed: over 7 years ago

caseywdunn/agalmar
A collection of tools for analyzing agalma expression projects
  • * DESCRIPTION

Size: 318 KB - Last synced: over 1 year ago

emorisse/ROpenShift
Running R on OpenShift
  • * lib64/R/library/corrplot/DESCRIPTION

Size: 89 MB - Last synced: 12 months ago - Pushed: about 11 years ago

raihan19/raihans-projects
  • * R/x86_64-pc-linux-gnu-library/3.4/dendextend/DESCRIPTION

Size: 372 MB - Last synced: over 1 year ago

tsabitov/SedSat2
Project goal is to updated Sediment Source Assessment Tool (Sed_SAT) for Determining the Sources of Fine-Grained Sediment - By Lillian E. Gorman Sanisaca, Allen C. Gellis, and David L. Lorenz with R-shiny framework.
  • * R-Portable/App/R-Portable/library/dendextend/DESCRIPTION

Last synced: over 1 year ago

al22/heatmap2colden
Combines gplots::heatmap.2 and coldendr to produce heatmaps with colored row/col dendrograms
  • * DESCRIPTION

Last synced: over 1 year ago

NoeDemange/OrderedHeatMapAnalysis
OrderedHeatMapAnalysis (OHMA) is a direct data analysis framework allowing to simultaneously visualize and analyze the structure of complex datasets. An optimized seriation of rows and columns of the input data table is performed, resulting in a mapping of the whole dataset into an ordered heatmap.
  • * DESCRIPTION

Size: 5.64 MB - Last synced: 3 months ago - Pushed: 3 months ago

cran/ChemoSpec
:exclamation: This is a read-only mirror of the CRAN R package repository. ChemoSpec — Exploratory Chemometrics for Spectroscopy. Homepage: https://bryanhanson.github.io/ChemoSpec/ Report bugs for this package: https://github.com/bryanhanson/ChemoSpec/issues
  • * DESCRIPTION

Size: 30.7 MB - Last synced: 3 months ago - Pushed: 3 months ago

krzbar/RMaCzek
Czekanowski's Diagrams
  • >= 1.3.4 DESCRIPTION

Size: 65.4 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

thomasp85/tidygraph
A tidy API for graph manipulation
  • * DESCRIPTION

Size: 28.7 MB - Last synced: 5 days ago - Pushed: 3 months ago

HBPMedical/heatmaply Fork of talgalili/heatmaply
Interactive Heat Maps for R Using plotly
  • * DESCRIPTION

Size: 5.41 MB - Last synced: 9 months ago - Pushed: 10 months ago

david-barnett/microViz
R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
  • * DESCRIPTION

Size: 399 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

quadfather85/ggplot2-book Fork of hadley/ggplot2-book
ggplot2: elegant graphics for data analysis
  • * DESCRIPTION

Size: 48.8 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

cran/ClusteredMutations
:exclamation: This is a read-only mirror of the CRAN R package repository. ClusteredMutations — Location and Visualization of Clustered Somatic Mutations
  • * DESCRIPTION

Size: 967 KB - Last synced: 9 months ago - Pushed: over 4 years ago

cran/corrr
:exclamation: This is a read-only mirror of the CRAN R package repository. corrr — Correlations in R. Homepage: https://github.com/tidymodels/corrr, https://corrr.tidymodels.org Report bugs for this package: https://github.com/tidymodels/corrr/issues
  • >=1.2 DESCRIPTION

Size: 1.02 MB - Last synced: 9 months ago - Pushed: over 1 year ago

pablogf75/flexclust Fork of cran/flexclust
:exclamation: This is a read-only mirror of the CRAN R package repository. flexclust — Flexible Cluster Algorithms
  • * DESCRIPTION

Size: 504 KB - Last synced: about 1 year ago - Pushed: about 10 years ago

xtmgah/corrplot Fork of taiyun/corrplot
Package corrplot is for visualizing a correlation matrix
  • * DESCRIPTION

Size: 333 KB - Last synced: 9 months ago - Pushed: almost 9 years ago

yitang/corrplot Fork of taiyun/corrplot
Package corrplot is for visualizing a correlation matrix
  • * DESCRIPTION

Size: 314 KB - Last synced: about 2 months ago - Pushed: almost 9 years ago

lukas.novak/overall-depression-severity-and-impairment-scale-validation
This study aims to explore psychometric parameters of the Overall Depression Severity and Impairment Scale (ODSIS) in the Czech Republic.
  • * Packages/corrplot/DESCRIPTION

Last synced: 11 months ago

nagyist/drsimon.corrgram Fork of drsimonj/corrgram
Correlograms
  • * DESCRIPTION

Size: 1.41 MB - Last synced: 29 days ago - Pushed: over 8 years ago

cran/adepro
:exclamation: This is a read-only mirror of the CRAN R package repository. adepro — A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles. Homepage: https://github.com/Bayer-Group/BIC-AdEPro
  • >= 1.3.0 DESCRIPTION

Size: 105 KB - Last synced: 12 days ago - Pushed: 12 days ago

cran/mbgraphic
:exclamation: This is a read-only mirror of the CRAN R package repository. mbgraphic — Measure Based Graphic Selection
  • * DESCRIPTION

Size: 4.86 MB - Last synced: 9 months ago - Pushed: over 4 years ago

cran/MEDseq
:exclamation: This is a read-only mirror of the CRAN R package repository. MEDseq — Mixtures of Exponential-Distance Models with Covariates. Homepage: https://cran.r-project.org/package=MEDseq Report bugs for this package: https://github.com/Keefe-Murphy/MEDseq
  • * DESCRIPTION

Size: 7.53 MB - Last synced: 5 months ago - Pushed: 5 months ago

cran/tidygraph
:exclamation: This is a read-only mirror of the CRAN R package repository. tidygraph — A Tidy API for Graph Manipulation. Homepage: https://tidygraph.data-imaginist.com, https://github.com/thomasp85/tidygraph Report bugs for this package: https://github.com/thomasp85/tidygraph/issues
  • * DESCRIPTION

Size: 301 KB - Last synced: 3 months ago - Pushed: 3 months ago

cabiling/corrgram Fork of kwstat/corrgram
Correlograms
  • * DESCRIPTION

Size: 1.41 MB - Last synced: 9 months ago - Pushed: over 8 years ago

chadbrewbaker/corrgram Fork of kwstat/corrgram
Correlograms
  • * DESCRIPTION

Size: 738 KB - Last synced: about 1 year ago - Pushed: over 8 years ago

pknight24/methylscaper
Efficient visualizations for DNA methylation data
  • * DESCRIPTION

Size: 386 KB - Last synced: about 1 year ago - Pushed: over 3 years ago

cran/qlcVisualize
:exclamation: This is a read-only mirror of the CRAN R package repository. qlcVisualize — Visualization for Quantitative Language Comparison (QLC)
  • * DESCRIPTION

Size: 52.7 KB - Last synced: 9 months ago - Pushed: over 8 years ago

cran/DeLorean
:exclamation: This is a read-only mirror of the CRAN R package repository. DeLorean — Estimates Pseudotimes for Single Cell Expression Data
  • * DESCRIPTION

Size: 2.37 MB - Last synced: 9 months ago - Pushed: over 5 years ago

soccin/BIC-RNAseq
Bioinformatics core RNAseq pipeline
  • * lib/R-4.0.0/dendextend/DESCRIPTION

Size: 215 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

ISAAKiel/quantAAR
R Package - Quantitative Analysis in Archaeology
  • >= 1.2 DESCRIPTION

Size: 2.54 MB - Last synced: 9 months ago - Pushed: almost 4 years ago

SummerZang/corrplot Fork of taiyun/corrplot
Package corrplot is for visualizing a correlation matrix
  • * DESCRIPTION

Size: 98.6 KB - Last synced: about 1 year ago - Pushed: over 8 years ago

momeara/CalCEN
Candida albicans co-expression
  • >= 1.2 DESCRIPTION

Size: 8.9 MB - Last synced: 7 months ago - Pushed: over 1 year ago

shearer/medplot Fork of crtahlin/medplot
Functions for drawing graphs in R visualizing medical information.
  • * DESCRIPTION

Size: 5.17 MB - Last synced: 9 months ago - Pushed: over 8 years ago

holgerbrandl/nesoni Fork of Victorian-Bioinformatics-Consortium/nesoni
High throughput sequencing analysis tools
  • * nesoni/nesoni-r/DESCRIPTION

Size: 3.11 MB - Last synced: 14 days ago - Pushed: about 8 years ago

cran/pergola
:exclamation: This is a read-only mirror of the CRAN R package repository. pergola — Toolbox for Polyploid Genetic Data. Homepage: http://github.com/grafab/pergola Report bugs for this package: http://github.com/grafab/pergola/issues
  • * DESCRIPTION

Size: 446 KB - Last synced: 9 months ago - Pushed: about 8 years ago

zhilongjia/corrplot Fork of taiyun/corrplot
Package corrplot is for visualizing a correlation matrix
  • * DESCRIPTION

Size: 58.6 KB - Last synced: about 1 year ago - Pushed: about 8 years ago