Ecosyste.ms: Repos
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Package Usage: cran: seriation
Infrastructure for Ordering Objects Using Seriation
48 versions
Latest release: 5 months ago
28 dependent packages
View more package details: https://packages.ecosyste.ms/registries/cran.r-project.org/packages/seriation
View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/mhahsler%2Fseriation
Dependent Repos 78
r4ds/bookclub-ggplot2
ggplot2 Book Club- * DESCRIPTION
Size: 143 MB - Last synced: 24 days ago - Pushed: about 1 month ago
hadley/ggplot2-book
ggplot2: elegant graphics for data analysis- * DESCRIPTION
Size: 49.2 MB - Last synced: 5 days ago - Pushed: 12 days ago
MonashBioinformaticsPlatform/varistran
R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data- * DESCRIPTION
Size: 1010 KB - Last synced: 7 months ago - Pushed: about 4 years ago
rseng/rsepedia-analysis
Exploring clustering of research software encyclopedia entries- * _repos/github/david-barnett/microViz/DESCRIPTION
Size: 433 MB - Last synced: 5 days ago - Pushed: 7 days ago
jpquast/protti
Picotti lab data analysis package.- * DESCRIPTION
Size: 37.6 MB - Last synced: 3 days ago - Pushed: 3 days ago
trinker/CAseriation
Package for contingency table seriation by means of Correspondence Analysis- * DESCRIPTION
Size: 57.6 KB - Last synced: about 1 year ago - Pushed: over 9 years ago
JVAdams/jvamisc
Miscellaneous utility functions (R package).- * DESCRIPTION
Size: 100 MB - Last synced: 9 months ago - Pushed: almost 3 years ago
talgalili/dendextend
Extending R's Dendrogram Functionality- * DESCRIPTION
Size: 59.1 MB - Last synced: 5 days ago - Pushed: 5 months ago
wenbostar/metaX
metaX: a flexible and comprehensive software for processing omics data.- * DESCRIPTION
Size: 51.2 MB - Last synced: 9 months ago - Pushed: 11 months ago
tidymodels/corrr
Explore correlations in R- >= 1.2 DESCRIPTION
Size: 77.5 MB - Last synced: 5 days ago - Pushed: 4 months ago
knime/knime-r
KNIME Interactive R Statistics Integration- * org.knime.ext.r3.bin.win32.x86/R-Inst/library/arulesViz/DESCRIPTION
- * org.knime.ext.r3.bin.win32.x86/R-Inst/library/corrgram/DESCRIPTION
Size: 228 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
thomasp85/ggraph
Grammar of Graph Graphics- * DESCRIPTION
Size: 432 MB - Last synced: 14 days ago - Pushed: 2 months ago
jendelman/MapRtools
Tools for genetic mapping- * DESCRIPTION
Size: 1.12 MB - Last synced: 5 months ago - Pushed: 5 months ago
mhahsler/arulesViz
Visualizing Association Rules and Frequent Itemsets with R- * DESCRIPTION
Size: 31 MB - Last synced: 8 days ago - Pushed: 12 days ago
mikldk/disclapmix
Discrete Laplace Mixture Inference using the EM Algorithm- * DESCRIPTION
Size: 1.55 MB - Last synced: about 1 month ago - Pushed: 9 months ago
bryanhanson/ChemoSpec
R functions for the chemometric analysis of spectra- * DESCRIPTION
Size: 288 MB - Last synced: 2 days ago - Pushed: 3 months ago
cran/flexclust
:exclamation: This is a read-only mirror of the CRAN R package repository. flexclust — Flexible Cluster Algorithms- * DESCRIPTION
Size: 329 KB - Last synced: 10 days ago - Pushed: 10 days ago
r-pkg-team/r-cran-corrplot
Debian packaging of CRAN package corrplot (https://cran.r-project.org/web/packages/corrplot/)- * DESCRIPTION
Last synced: over 1 year ago
r-pkg-team/r-cran-heatmaply
GNU R interactive cluster heat maps using 'plotly'- * DESCRIPTION
Last synced: over 1 year ago
cran/dendsort
:exclamation: This is a read-only mirror of the CRAN R package repository. dendsort — Modular Leaf Ordering Methods for Dendrogram Nodes. Homepage: https://github.com/evanbiederstedt/dendsort Report bugs for this package: https://github.com/evanbiederstedt/dendsort/issues- * DESCRIPTION
Size: 2.27 MB - Last synced: 9 months ago - Pushed: about 3 years ago
trangdata/treeheatr
Heatmap-integrated Decision Tree Visualizations- * DESCRIPTION
Size: 41.6 MB - Last synced: 4 days ago - Pushed: 10 months ago
kwstat/corrgram
Correlograms- * DESCRIPTION
Size: 3.22 MB - Last synced: 6 days ago - Pushed: 3 months ago
evanbiederstedt/dendsort
dendsort: Modular Leaf Ordering Methods for Dendrogram Nodes- * DESCRIPTION
Size: 6.22 MB - Last synced: 17 days ago - Pushed: almost 3 years ago
talgalili/heatmaply
Interactive Heat Maps for R Using plotly- * DESCRIPTION
Size: 6.36 MB - Last synced: 5 days ago - Pushed: 12 days ago
JohnReid/DeLorean
R package to model time series accounting for noise in the temporal dimension. Specifically designed for single cell transcriptome experiments.- * DESCRIPTION
Size: 45.7 MB - Last synced: about 1 year ago - Pushed: over 2 years ago
r-pkg-team/r-cran-tidygraph
GNU R tidy API for graph manipulation- * DESCRIPTION
Last synced: about 1 year ago
r-pkg-team/r-cran-ggraph
GNU R implementation of grammar of graphics for graphs and networks- * DESCRIPTION
Last synced: about 1 year ago
r-pkg-team/r-cran-dendextend
Extending 'dendrogram' Functionality in GNU R- * DESCRIPTION
Last synced: 11 months ago
r-pkg-team/r-cran-dendsort
GNU R Modular Leaf Ordering Methods for Dendrogram Nodes- * DESCRIPTION
Last synced: about 1 year ago
grasshoppermouse/hagenutils
- * DESCRIPTION
Size: 2.05 MB - Last synced: 18 days ago - Pushed: 19 days ago
bahlolab/AmpSeqR
Multi-locus Sequence Type Identificatino from Multiplexed Amplicon Deep Sequencing- * DESCRIPTION
Size: 16.8 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
andreasleha/heatmap2colden
plotting heatmaps with colored dendrograms- * DESCRIPTION
Size: 113 KB - Last synced: about 1 year ago - Pushed: over 11 years ago
cran/arulesViz
:exclamation: This is a read-only mirror of the CRAN R package repository. arulesViz — Visualizing Association Rules and Frequent Itemsets. Homepage: https://github.com/mhahsler/arulesViz Report bugs for this package: https://github.com/mhahsler/arulesViz/issues- * DESCRIPTION
Size: 9.84 MB - Last synced: 11 days ago - Pushed: 11 days ago
cran/matie
:exclamation: This is a read-only mirror of the CRAN R package repository. matie — Measuring Association and Testing Independence Efficiently- * DESCRIPTION
Size: 176 KB - Last synced: 9 months ago - Pushed: about 10 years ago
Xinming9606/intro-ggplot2-cn
- * DESCRIPTION
Size: 7.7 MB - Last synced: about 1 year ago - Pushed: about 3 years ago
r-forge/corrplot
Read-only mirror of "corrplot" from r-forge SVN.- * pkg/corrplot/DESCRIPTION
Size: 396 KB - Last synced: 9 months ago - Pushed: about 2 years ago
cran/corrplot
:exclamation: This is a read-only mirror of the CRAN R package repository. corrplot — Visualization of a Correlation Matrix. Homepage: https://github.com/taiyun/corrplot Report bugs for this package: https://github.com/taiyun/corrplot/issues- * DESCRIPTION
Size: 33.8 MB - Last synced: 9 months ago - Pushed: over 2 years ago
rhondabacher/methylscaper
- * DESCRIPTION
Size: 12 MB - Last synced: 6 months ago - Pushed: 9 months ago
plger/sechm
Wrapper around ComplexHeatmap for SummarizedExperiment objects- * DESCRIPTION
Size: 257 KB - Last synced: about 2 months ago - Pushed: 6 months ago
crtahlin/plotTests
Plot of medical data test results.- * DESCRIPTION
Size: 3 MB - Last synced: 11 months ago - Pushed: about 9 years ago
cysouw/qlcVisualize
Visualization for Quantitative Language Comparison- * DESCRIPTION
Size: 131 KB - Last synced: 24 days ago - Pushed: over 2 years ago
taiyun/corrplot
A visual exploratory tool on correlation matrix- * DESCRIPTION
Size: 32.8 MB - Last synced: 5 days ago - Pushed: 8 days ago
Victorian-Bioinformatics-Consortium/nesoni
High throughput sequencing analysis tools- * nesoni/nesoni-r/DESCRIPTION
Size: 3.14 MB - Last synced: about 1 month ago - Pushed: over 1 year ago
behuang/mpMap
R/mpMap source code- * DESCRIPTION
Size: 1.56 MB - Last synced: 7 months ago - Pushed: over 6 years ago
cran/DendSer
:exclamation: This is a read-only mirror of the CRAN R package repository. DendSer — Dendrogram Seriation: Ordering for Visualisation- * DESCRIPTION
Size: 18.6 KB - Last synced: 7 months ago - Pushed: about 1 year ago
rohan-shah/mpMapInteractive
Interactive marker ordering code for the mpMap package- * DESCRIPTION
Size: 493 KB - Last synced: 7 months ago - Pushed: over 6 years ago
cran/corrgram
:exclamation: This is a read-only mirror of the CRAN R package repository. corrgram — Plot a Correlogram. Homepage: https://kwstat.github.io/corrgram/ Report bugs for this package: https://github.com/kwstat/corrgram/issues/- * DESCRIPTION
Size: 2.2 MB - Last synced: 7 months ago - Pushed: about 3 years ago
KNIME/knime-r
- * org.knime.ext.r3.bin.win32.x86/R-Inst/library/arulesViz/DESCRIPTION
- * org.knime.ext.r3.bin.win32.x86/R-Inst/library/corrgram/DESCRIPTION
Size: 241 MB - Last synced: over 1 year ago
cran/relations
:exclamation: This is a read-only mirror of the CRAN R package repository. relations — Data Structures and Algorithms for Relations- * DESCRIPTION
Size: 3.96 MB - Last synced: 9 months ago - Pushed: about 1 year ago
crtahlin/medplot
Functions for drawing graphs in R visualizing medical information.- * DESCRIPTION
Size: 5.17 MB - Last synced: 7 months ago - Pushed: over 8 years ago
r-forge/delmap
Read-only mirror of "delmap" from r-forge SVN.- * RcppExample/pkg/DESCRIPTION
- * pkg/DESCRIPTION
Size: 419 KB - Last synced: 9 months ago - Pushed: about 2 years ago
cran/dendextend
:exclamation: This is a read-only mirror of the CRAN R package repository. dendextend — Extending 'dendrogram' Functionality in R. Homepage: http://talgalili.github.io/dendextend/, https://github.com/talgalili/dendextend/, https://cran.r-project.org/package=dendextend, https://www.r-statistics.com/tag/dendextend/, htt ...- * DESCRIPTION
Size: 28.2 MB - Last synced: 7 months ago - Pushed: about 1 year ago
eb-margolis-neuroscience-lab/meap
- * meapr/DESCRIPTION
Size: 1.66 MB - Last synced: 15 days ago - Pushed: 15 days ago
cran/mpMap
:exclamation: This is a read-only mirror of the CRAN R package repository. mpMap — Multi-parent RIL genetic analysis- * DESCRIPTION
Size: 242 KB - Last synced: 7 months ago - Pushed: about 10 years ago
cran/disclapmix
:exclamation: This is a read-only mirror of the CRAN R package repository. disclapmix — Discrete Laplace Mixture Inference using the EM Algorithm. Homepage: http://dx.doi.org/10.1016/j.jtbi.2013.03.009 https://arxiv.org/abs/1304.2129 Report bugs for this package: https://github.com/mikldk/disclapmix/issues- * DESCRIPTION
Size: 493 KB - Last synced: 9 months ago - Pushed: almost 2 years ago
bwrc/semigeom-r
Semigeometric Tiling of Event Sequences- * DESCRIPTION
Size: 41 KB - Last synced: about 2 months ago - Pushed: over 7 years ago
caseywdunn/agalmar
A collection of tools for analyzing agalma expression projects- * DESCRIPTION
Size: 318 KB - Last synced: over 1 year ago
emorisse/ROpenShift
Running R on OpenShift- * lib64/R/library/corrplot/DESCRIPTION
Size: 89 MB - Last synced: 12 months ago - Pushed: about 11 years ago
raihan19/raihans-projects
- * R/x86_64-pc-linux-gnu-library/3.4/dendextend/DESCRIPTION
Size: 372 MB - Last synced: over 1 year ago
tsabitov/SedSat2
Project goal is to updated Sediment Source Assessment Tool (Sed_SAT) for Determining the Sources of Fine-Grained Sediment - By Lillian E. Gorman Sanisaca, Allen C. Gellis, and David L. Lorenz with R-shiny framework.- * R-Portable/App/R-Portable/library/dendextend/DESCRIPTION
Last synced: over 1 year ago
al22/heatmap2colden
Combines gplots::heatmap.2 and coldendr to produce heatmaps with colored row/col dendrograms- * DESCRIPTION
Last synced: over 1 year ago
NoeDemange/OrderedHeatMapAnalysis
OrderedHeatMapAnalysis (OHMA) is a direct data analysis framework allowing to simultaneously visualize and analyze the structure of complex datasets. An optimized seriation of rows and columns of the input data table is performed, resulting in a mapping of the whole dataset into an ordered heatmap.- * DESCRIPTION
Size: 5.64 MB - Last synced: 3 months ago - Pushed: 3 months ago
cran/ChemoSpec
:exclamation: This is a read-only mirror of the CRAN R package repository. ChemoSpec — Exploratory Chemometrics for Spectroscopy. Homepage: https://bryanhanson.github.io/ChemoSpec/ Report bugs for this package: https://github.com/bryanhanson/ChemoSpec/issues- * DESCRIPTION
Size: 30.7 MB - Last synced: 3 months ago - Pushed: 3 months ago
krzbar/RMaCzek
Czekanowski's Diagrams- >= 1.3.4 DESCRIPTION
Size: 65.4 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
thomasp85/tidygraph
A tidy API for graph manipulation- * DESCRIPTION
Size: 28.7 MB - Last synced: 5 days ago - Pushed: 3 months ago
HBPMedical/heatmaply Fork of talgalili/heatmaply
Interactive Heat Maps for R Using plotly- * DESCRIPTION
Size: 5.41 MB - Last synced: 9 months ago - Pushed: 10 months ago
david-barnett/microViz
R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.- * DESCRIPTION
Size: 399 MB - Last synced: about 1 month ago - Pushed: about 1 month ago
quadfather85/ggplot2-book Fork of hadley/ggplot2-book
ggplot2: elegant graphics for data analysis- * DESCRIPTION
Size: 48.8 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
cran/ClusteredMutations
:exclamation: This is a read-only mirror of the CRAN R package repository. ClusteredMutations — Location and Visualization of Clustered Somatic Mutations- * DESCRIPTION
Size: 967 KB - Last synced: 9 months ago - Pushed: over 4 years ago
cran/corrr
:exclamation: This is a read-only mirror of the CRAN R package repository. corrr — Correlations in R. Homepage: https://github.com/tidymodels/corrr, https://corrr.tidymodels.org Report bugs for this package: https://github.com/tidymodels/corrr/issues- >=1.2 DESCRIPTION
Size: 1.02 MB - Last synced: 9 months ago - Pushed: over 1 year ago
pablogf75/flexclust Fork of cran/flexclust
:exclamation: This is a read-only mirror of the CRAN R package repository. flexclust — Flexible Cluster Algorithms- * DESCRIPTION
Size: 504 KB - Last synced: about 1 year ago - Pushed: about 10 years ago
xtmgah/corrplot Fork of taiyun/corrplot
Package corrplot is for visualizing a correlation matrix- * DESCRIPTION
Size: 333 KB - Last synced: 9 months ago - Pushed: almost 9 years ago
yitang/corrplot Fork of taiyun/corrplot
Package corrplot is for visualizing a correlation matrix- * DESCRIPTION
Size: 314 KB - Last synced: about 2 months ago - Pushed: almost 9 years ago
lukas.novak/overall-depression-severity-and-impairment-scale-validation
This study aims to explore psychometric parameters of the Overall Depression Severity and Impairment Scale (ODSIS) in the Czech Republic.- * Packages/corrplot/DESCRIPTION
Last synced: 11 months ago
nagyist/drsimon.corrgram Fork of drsimonj/corrgram
Correlograms- * DESCRIPTION
Size: 1.41 MB - Last synced: 29 days ago - Pushed: over 8 years ago
cran/adepro
:exclamation: This is a read-only mirror of the CRAN R package repository. adepro — A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles. Homepage: https://github.com/Bayer-Group/BIC-AdEPro- >= 1.3.0 DESCRIPTION
Size: 105 KB - Last synced: 12 days ago - Pushed: 12 days ago
cran/mbgraphic
:exclamation: This is a read-only mirror of the CRAN R package repository. mbgraphic — Measure Based Graphic Selection- * DESCRIPTION
Size: 4.86 MB - Last synced: 9 months ago - Pushed: over 4 years ago
cran/MEDseq
:exclamation: This is a read-only mirror of the CRAN R package repository. MEDseq — Mixtures of Exponential-Distance Models with Covariates. Homepage: https://cran.r-project.org/package=MEDseq Report bugs for this package: https://github.com/Keefe-Murphy/MEDseq- * DESCRIPTION
Size: 7.53 MB - Last synced: 5 months ago - Pushed: 5 months ago
cran/tidygraph
:exclamation: This is a read-only mirror of the CRAN R package repository. tidygraph — A Tidy API for Graph Manipulation. Homepage: https://tidygraph.data-imaginist.com, https://github.com/thomasp85/tidygraph Report bugs for this package: https://github.com/thomasp85/tidygraph/issues- * DESCRIPTION
Size: 301 KB - Last synced: 3 months ago - Pushed: 3 months ago
cabiling/corrgram Fork of kwstat/corrgram
Correlograms- * DESCRIPTION
Size: 1.41 MB - Last synced: 9 months ago - Pushed: over 8 years ago
chadbrewbaker/corrgram Fork of kwstat/corrgram
Correlograms- * DESCRIPTION
Size: 738 KB - Last synced: about 1 year ago - Pushed: over 8 years ago
pknight24/methylscaper
Efficient visualizations for DNA methylation data- * DESCRIPTION
Size: 386 KB - Last synced: about 1 year ago - Pushed: over 3 years ago
cran/qlcVisualize
:exclamation: This is a read-only mirror of the CRAN R package repository. qlcVisualize — Visualization for Quantitative Language Comparison (QLC)- * DESCRIPTION
Size: 52.7 KB - Last synced: 9 months ago - Pushed: over 8 years ago
cran/DeLorean
:exclamation: This is a read-only mirror of the CRAN R package repository. DeLorean — Estimates Pseudotimes for Single Cell Expression Data- * DESCRIPTION
Size: 2.37 MB - Last synced: 9 months ago - Pushed: over 5 years ago
soccin/BIC-RNAseq
Bioinformatics core RNAseq pipeline- * lib/R-4.0.0/dendextend/DESCRIPTION
Size: 215 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
ISAAKiel/quantAAR
R Package - Quantitative Analysis in Archaeology- >= 1.2 DESCRIPTION
Size: 2.54 MB - Last synced: 9 months ago - Pushed: almost 4 years ago
SummerZang/corrplot Fork of taiyun/corrplot
Package corrplot is for visualizing a correlation matrix- * DESCRIPTION
Size: 98.6 KB - Last synced: about 1 year ago - Pushed: over 8 years ago
momeara/CalCEN
Candida albicans co-expression- >= 1.2 DESCRIPTION
Size: 8.9 MB - Last synced: 7 months ago - Pushed: over 1 year ago
shearer/medplot Fork of crtahlin/medplot
Functions for drawing graphs in R visualizing medical information.- * DESCRIPTION
Size: 5.17 MB - Last synced: 9 months ago - Pushed: over 8 years ago
holgerbrandl/nesoni Fork of Victorian-Bioinformatics-Consortium/nesoni
High throughput sequencing analysis tools- * nesoni/nesoni-r/DESCRIPTION
Size: 3.11 MB - Last synced: 14 days ago - Pushed: about 8 years ago
cran/pergola
:exclamation: This is a read-only mirror of the CRAN R package repository. pergola — Toolbox for Polyploid Genetic Data. Homepage: http://github.com/grafab/pergola Report bugs for this package: http://github.com/grafab/pergola/issues- * DESCRIPTION
Size: 446 KB - Last synced: 9 months ago - Pushed: about 8 years ago
zhilongjia/corrplot Fork of taiyun/corrplot
Package corrplot is for visualizing a correlation matrix- * DESCRIPTION
Size: 58.6 KB - Last synced: about 1 year ago - Pushed: about 8 years ago