tidygraph | cran | Package Usage

pratikunterwegs/pathomove

Individual-based model to simulate the evolution of movement strategies under risk of pathogen spread.

* DESCRIPTION

Size: 7.43 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

vibscc/DALI

R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem

* DESCRIPTION

Size: 8.95 MB - Last synced: 2 months ago - Pushed: about 1 year ago

nrennie/aRt

R package to create generative art.

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Size: 23.3 MB - Last synced: 6 months ago - Pushed: 6 months ago

stocnet/migraph

Tools for multimodal and multilevel network analysis

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Size: 390 MB - Last synced: 3 days ago - Pushed: 4 days ago

ShawONEX/global-news-interactive-data

* consumer-price-index/scripts/DESCRIPTION

Size: 6.59 MB - Last synced: 4 months ago - Pushed: 4 months ago

sfirke/janitor

simple tools for data cleaning in R

* DESCRIPTION

Size: 6.55 MB - Last synced: 3 days ago - Pushed: 3 days ago

schochastics/edgebundle

R package implementing edge bundling algorithms

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Size: 15 MB - Last synced: 8 days ago - Pushed: 3 months ago

RoheLab/vsp

Vintage Sparse PCA for Semi-Parametric Network Analysis

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Size: 7.54 MB - Last synced: about 2 months ago - Pushed: 3 months ago

r4ds/bookclub-ggplot2

ggplot2 Book Club

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Size: 143 MB - Last synced: about 1 month ago - Pushed: about 2 months ago

Hy4m/linkET

Everything is Linkable

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Size: 2.63 MB - Last synced: 2 months ago - Pushed: 12 months ago

hadley/ggplot2-book

ggplot2: elegant graphics for data analysis

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Size: 49.2 MB - Last synced: 11 days ago - Pushed: about 1 month ago

aarkilanian/dci

Calculates the dendritic connectivity index in river networks

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Size: 5.17 MB - Last synced: 4 months ago - Pushed: 4 months ago

lazappi/clustree

Visualise Clusterings at Different Resolutions

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Size: 36.9 MB - Last synced: 5 days ago - Pushed: 7 months ago

sulab-wmu/scPagwas

Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data

* DESCRIPTION

Size: 992 MB - Last synced: 13 days ago - Pushed: about 1 month ago

zxzhangragnar/CycleFlux

cycle demo for test

* DESCRIPTION

Size: 87.8 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago

marioangst/motifr

Motif analysis in multi-level networks

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Size: 49.2 MB - Last synced: 4 days ago - Pushed: about 3 years ago

r-causal/ggdag

:arrow_lower_left: :arrow_lower_right: An R package for working with causal directed acyclic graphs (DAGs)

* DESCRIPTION

Size: 172 MB - Last synced: 24 days ago - Pushed: 2 months ago

pachterlab/LP_2021

* supplement/DESCRIPTION

Size: 1.39 GB - Last synced: 16 days ago - Pushed: about 1 month ago

stevepowell99/CausalMapFunctions

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Size: 9.91 MB - Last synced: 8 months ago - Pushed: 8 months ago

tidymicrobiome/microbiomeplot

All the plot functions for tidymicrobiome

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Size: 1.73 MB - Last synced: 9 months ago - Pushed: over 1 year ago

cjyetman/network.r2d3

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Size: 6.74 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

rseng/rsepedia-analysis

Exploring clustering of research software encyclopedia entries

* _repos/github/david-barnett/microViz/DESCRIPTION
* _repos/github/easystats/correlation/DESCRIPTION

Size: 435 MB - Last synced: 10 days ago - Pushed: 11 days ago

kharchenkolab/numbat

Haplotype-aware CNV analysis from single-cell RNA-seq

* DESCRIPTION

Size: 367 MB - Last synced: 9 days ago - Pushed: 22 days ago

selcenari/ceRNAnetsim

Simulation of interactions miRNA:Competing Targets

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Size: 28.9 MB - Last synced: 17 days ago - Pushed: 4 months ago

jtr13/cc21

Community Contributions GR5702 "EDAV" Spring 2021

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Size: 71.8 MB - Last synced: 12 months ago - Pushed: over 2 years ago

KevinSee/PITcleanr

Compress PIT tag capture histories for use in various analyses

>= 1.2.0 DESCRIPTION

Size: 20.3 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

overton-group/eHDPrep

Electronic Health Data Preparation (eHDPrep) R package

>= 1.2.0 DESCRIPTION

Size: 4.17 MB - Last synced: 6 months ago - Pushed: 12 months ago

ImmuneDynamics/Spectre

A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.

* DESCRIPTION

Size: 602 MB - Last synced: 14 days ago - Pushed: about 1 month ago

dynverse/dyngen

Simulating single-cell data using gene regulatory networks 📠

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Size: 607 MB - Last synced: 28 days ago - Pushed: 3 months ago

NetCoupler/NetCoupler

Inference of causal links between metabolomics and disease incidence

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Size: 10.8 MB - Last synced: 4 months ago - Pushed: 4 months ago

UrbanAnalyst/dodgr

Distances on Directed Graphs in R

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Size: 9.93 MB - Last synced: 24 days ago - Pushed: 3 months ago

luukvdmeer/sfnetworks

Tidy Geospatial Networks in R

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Size: 65.1 MB - Last synced: 7 days ago - Pushed: about 2 months ago

datastorm-open/visNetwork

R package, using vis.js library for network visualization

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Size: 9.75 MB - Last synced: 4 days ago - Pushed: about 1 month ago

ropensci/rmangal

Retrieve and explore data from the ecological interactions database MANGAL

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Size: 13.9 MB - Last synced: 4 days ago - Pushed: 5 months ago

Huber-group-EMBL/mofaCLL

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Size: 108 MB - Last synced: 2 months ago - Pushed: 2 months ago

thomasp85/ggraph

Grammar of Graph Graphics

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Size: 432 MB - Last synced: 16 days ago - Pushed: 3 months ago

mattansb/cheatR

Catch 'em cheaters!

* DESCRIPTION

Size: 1.07 MB - Last synced: 7 months ago - Pushed: about 2 years ago

ropensci-archive/tidytags 📦

⛔ ARCHIVED ⛔ Importing and Analyzing Twitter Data Collected with Twitter Archiving Google Sheets

* DESCRIPTION

Size: 15.4 MB - Last synced: about 1 month ago - Pushed: 4 months ago

heurekalabsco/ddh

package containing raw functions to support the ddh app

* DESCRIPTION

Size: 1.44 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

ben-e/wand

`wand` fits `torch` powered GAMs in a `tidymodels` friendly framework.

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Size: 716 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

mhahsler/arulesViz

Visualizing Association Rules and Frequent Itemsets with R

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Size: 31 MB - Last synced: 4 days ago - Pushed: 30 days ago

elong0527/multinma-test

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Size: 7.95 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

networkingarchives/r_and_wikidata

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Size: 14.9 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

eriqande/HatcheryPedAgree

Run SNPPIT easily and compare hatchery pedigrees

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Size: 1.11 MB - Last synced: 8 months ago - Pushed: 8 months ago

ddiez/scmisc

Miscellaneous tools for single cell analysis

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Size: 5.45 MB - Last synced: 16 days ago - Pushed: 4 months ago

joaomacalos/sfcr

Simulate Stock-Flow Consistent Models

* DESCRIPTION

Size: 30.8 MB - Last synced: 5 days ago - Pushed: over 2 years ago

hope-data-science/akc

Automatic knowledge classification based on keyword co-occurrrence network

>= 1.1.2 DESCRIPTION

Size: 16.2 MB - Last synced: 5 days ago - Pushed: over 1 year ago

metabolomicsworkbench/MetENP

* DESCRIPTION

Size: 41 MB - Last synced: 18 days ago - Pushed: 18 days ago

:exclamation: This is a read-only mirror of the CRAN R package repository. visNetwork — Network Visualization using 'vis.js' Library. Homepage: https://datastorm-open.github.io/visNetwork/ Report bugs for this package: https://github.com/datastorm-open/visNetwork/issues

* DESCRIPTION

Size: 12.5 MB - Last synced: 7 months ago - Pushed: over 1 year ago

JohnCoene/grapher

✍️ Large interactive graphs

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Size: 16.5 MB - Last synced: 12 days ago - Pushed: over 1 year ago

AlexanderKirchmair/datamisc

Miscellaneous functions for basic data analysis used by myself

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Size: 405 KB - Last synced: 28 days ago - Pushed: 29 days ago

agoutsmedt/networkflow

An R Package With Functions To Help Manipulating Networks

* DESCRIPTION

Size: 15.1 MB - Last synced: 5 months ago - Pushed: 5 months ago

RemiMahmoud/kclique

* DESCRIPTION

Size: 170 KB - Last synced: 7 months ago - Pushed: about 1 year ago

jaspershen/massstat

* DESCRIPTION

Last synced: about 1 year ago

jaspershen/metpath

* DESCRIPTION

Last synced: over 1 year ago

pawanjangra1198/r

* x86_64-pc-linux-gnu-library/4.1/janitor/DESCRIPTION

Last synced: about 1 year ago

kaneplusplus/basket

Multisource Exchangeability Models

* DESCRIPTION

Size: 43.2 MB - Last synced: 4 days ago - Pushed: 10 months ago

apeterson91/rbenvo

rbenvo is a package of class (benvo) and methods for built environment data structures. They are designed to ease the use of working with these nonstandard data structures and improve interoperability with other R packages developing methods in this same space.

* DESCRIPTION

Size: 3.9 MB - Last synced: 7 months ago - Pushed: over 3 years ago

thomasp85/particles

A particle simulation engine based on a port of d3-force

* DESCRIPTION

Size: 19.6 MB - Last synced: 14 days ago - Pushed: almost 2 years ago

UchidaMizuki/timbr

Forest Data Frames

* DESCRIPTION

Size: 548 KB - Last synced: 5 days ago - Pushed: 11 months ago

matthieu-bruneaux/isotracer

R pkg for analysis of tracer addition experiments (https://matthieu-bruneaux.gitlab.io/isotracer/)

* DESCRIPTION

Last synced: 11 days ago

lindsayevanslee/whomds

Calculating results from WHO Model Disability Survey

* DESCRIPTION

Size: 9.03 MB - Last synced: 6 months ago - Pushed: 9 months ago

cschwem2er/stminsights

A Shiny Application for Inspecting Structural Topic Models

>= 1.1.0 DESCRIPTION

Size: 19 MB - Last synced: 5 days ago - Pushed: 5 months ago

RoheLab/fastRG

Sample Generalized Random Dot Product Graphs in Linear Time

* DESCRIPTION

Size: 27.7 MB - Last synced: 5 days ago - Pushed: 9 months ago

comeetie/greed

GREED: R package for Bayesian greedy clustering with several discrete latent variable models #sbm, #dcsbm, #dclbm #mm, #gmm

* DESCRIPTION

Size: 523 MB - Last synced: 5 days ago - Pushed: over 1 year ago

mikldk/malan

MAle Lineage ANalysis

>= 1.0.0.9999 DESCRIPTION

Size: 10.3 MB - Last synced: 9 days ago - Pushed: 4 months ago

J-Ramalho/industRial

* DESCRIPTION

Size: 53.5 MB - Last synced: 6 months ago - Pushed: about 2 years ago

jasenfinch/riches

Functional and structural enrichment for metabolomic analyses

* DESCRIPTION

Size: 19.4 MB - Last synced: 2 months ago - Pushed: 2 months ago

r-pkg-team/r-cran-ggraph

GNU R implementation of grammar of graphics for graphs and networks

* DESCRIPTION

Last synced: over 1 year ago

datawookie/trundler

Wrapper for Retail Pricing API

* DESCRIPTION

Size: 3.85 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

r-pkg-team/r-cran-visnetwork

* DESCRIPTION

Last synced: over 1 year ago

rscherrer/ExplicitGenomeSpeciation

An individual based simulation of adaptive speciation with explicit genome, additive and non-additive genetic effects

* egssimtools/DESCRIPTION
* egssimtools.Rcheck/00_pkg_src/egssimtools/DESCRIPTION
* egssimtools.Rcheck/egssimtools/DESCRIPTION

Size: 349 MB - Last synced: about 1 month ago - Pushed: almost 3 years ago

enpchina/histtext-r-client

An R package created during the ENP-China ERC project. Contains a set of functions used to access and process corpora stored in a SolR search platform. Most functions rely on a HistText-server installatin.

* DESCRIPTION

Last synced: over 1 year ago

rtaph/h2h

* DESCRIPTION

Size: 216 MB - Last synced: 6 months ago - Pushed: about 3 years ago

g-e-kenney/prettyClusters

Annotation, analysis and illustration of gene clusters

* DESCRIPTION

Size: 8.76 MB - Last synced: 13 days ago - Pushed: 6 months ago

paezha/envsocty3LT3

An open educational resource to teach topics and methods in transportation geography

* DESCRIPTION

Size: 83.2 MB - Last synced: 9 months ago - Pushed: about 1 year ago

caravagnalab/ctree

Clone trees for Cancer Evolution studies from bulk sequencing data.

* DESCRIPTION

Size: 4.73 MB - Last synced: about 1 year ago - Pushed: about 2 years ago

jaspershen/microbiomeplot

* DESCRIPTION

Last synced: over 1 year ago

lwjohnst/ecc-cmd-ukb

Early childhood and cardiometabolic disease in the UK Biobank.

* DESCRIPTION

Last synced: over 1 year ago

Cao-lab-zcmu/MCnebula

MCnebula algorithm integration in R

* DESCRIPTION

Size: 1.8 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago

ncborcherding/scRepertoire

A toolkit for single-cell immune profiling

* DESCRIPTION

Size: 126 MB - Last synced: 5 days ago - Pushed: 5 days ago

aberHRML/assignments

Automated molecular formula assignment for ultra-high resolution ESI-MS metabolomics data

* DESCRIPTION

Size: 8.6 MB - Last synced: 5 months ago - Pushed: 5 months ago

cbg-ethz/pareg

Pathway enrichment computations using a regularized regression approach to incorporate inter-pathway relations in the statistical model.

* DESCRIPTION

Size: 19.5 MB - Last synced: 5 days ago - Pushed: 11 months ago

JohnCoene/chirp

🔬Visualise Twitter Interactions

* DESCRIPTION

Size: 44.2 MB - Last synced: 24 days ago - Pushed: about 3 years ago

cran/arulesViz

:exclamation: This is a read-only mirror of the CRAN R package repository. arulesViz — Visualizing Association Rules and Frequent Itemsets. Homepage: https://github.com/mhahsler/arulesViz Report bugs for this package: https://github.com/mhahsler/arulesViz/issues

* DESCRIPTION

Size: 9.84 MB - Last synced: 29 days ago - Pushed: 29 days ago

mariosandovalmx/tlamatini

Tlamatini: Funciones utiles para el analisis de datos Biologicos/Ecologicos en Español.

* DESCRIPTION

Size: 9.24 MB - Last synced: 11 months ago - Pushed: 11 months ago

Xinming9606/intro-ggplot2-cn

* DESCRIPTION

Size: 7.7 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

DavisLaboratory/vissE

An R/Bioconductor package to identify higher-order molecular phenotypes

* DESCRIPTION

Size: 32.7 MB - Last synced: 16 days ago - Pushed: 4 months ago

pcastellanoescuder/fobitools

:package: Tools for Manipulating FOBI Ontology

* DESCRIPTION

Size: 19.2 MB - Last synced: 13 days ago - Pushed: 19 days ago

caravagnalab/revolver

REVOLVER - Repeated Evolution in Cancer

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Size: 142 MB - Last synced: 7 months ago - Pushed: over 1 year ago

jaspershen/microbiomedataset

* DESCRIPTION

Last synced: about 1 year ago

psychNerdJae/successr

R package for modeling Successor algorithms in reinforcement learning (i.e., Successor Representation, Successor Features).

* DESCRIPTION

Size: 67.4 KB - Last synced: over 1 year ago - Pushed: over 1 year ago

saeyslab/multinichenetr

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data