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Package Usage: maven: de.charite.compbio:jannovar-htsjdk

jannovar-htsjdk is the module for bridging between Jannovar and HTSJDK
28 versions
Latest release: over 1 year ago
3 dependent packages

View more package details: https://packages.ecosyste.ms/registries/repo1.maven.org/packages/de.charite.compbio:jannovar-htsjdk

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/charite%2Fjannovar

Dependent Repos 10

varfish-org/varfish-annotator
Annotate variants for import into VarFish server.
  • ${jannovar.version} varfish-annotator-cli/pom.xml
  • ${jannovar.version} varfish-annotator-core/pom.xml

Size: 38.2 MB - Last synced: 3 months ago - Pushed: 7 months ago

charite/jannovar
Annotation of VCF variants with functional impact and from databases (executable+library)
  • 0.40-SNAPSHOT jannovar-cli/pom.xml
  • 0.40-SNAPSHOT jannovar-filter/pom.xml
  • 0.40-SNAPSHOT jannovar-stats/pom.xml
  • 0.40-SNAPSHOT jannovar-vardbs/pom.xml

Size: 23.6 MB - Last synced: 5 days ago - Pushed: 5 days ago

charite/jannovar_tutorial 📦
Jannovar Tutorial Applications
  • 0.14 jgenecount/pom.xml
  • 0.14 jlink/pom.xml
  • 0.14 jped/pom.xml
  • 0.14 jqc/pom.xml

Size: 279 KB - Last synced: about 1 month ago - Pushed: almost 9 years ago

LaborBerlin/hum-exomiser-fork Fork of exomiser/Exomiser
A Tool to Annotate and Prioritize Exome Variants
  • ${jannovar.version} exomiser-core/pom.xml

Size: 273 MB - Last synced: 6 months ago - Pushed: 6 months ago

GeneDx/jannovar Fork of charite/jannovar
Annotation of VCF variants with functional impact and from databases (executable+library)
  • 0.42-SNAPSHOT jannovar-cli/pom.xml
  • 0.42-SNAPSHOT jannovar-filter/pom.xml
  • 0.42-SNAPSHOT jannovar-stats/pom.xml
  • 0.42-SNAPSHOT jannovar-vardbs/pom.xml

Size: 21.4 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

exomiser/Exomiser
A Tool to Annotate and Prioritize Exome Variants
  • ${jannovar.version} exomiser-core/pom.xml

Size: 279 MB - Last synced: 10 days ago - Pushed: about 2 months ago

PEDIA-Charite/exome-simulator
Exome simulator to generate "synthetic" exomes and add the variant information to the original jsons
  • 0.20 pom.xml

Size: 83 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

TQRG/BugSwarm
Critical Review of BugSwarm for Fault Localization and Program Repair
  • 0.18-SNAPSHOT BugSwarm/charite-jannovar-155352335/buggy_files/jannovar-cli/pom.xml
  • 0.23-SNAPSHOT BugSwarm/charite-jannovar-249719464/buggy_files/jannovar-cli/pom.xml
  • 0.23-SNAPSHOT BugSwarm/charite-jannovar-249719464/buggy_files/jannovar-filter/pom.xml
  • 0.23-SNAPSHOT BugSwarm/charite-jannovar-249719464/buggy_files/jannovar-stats/pom.xml
  • 0.23-SNAPSHOT BugSwarm/charite-jannovar-249719464/buggy_files/jannovar-vardbs/pom.xml
  • 0.16-SNAPSHOT BugSwarm/charite-jannovar-78561983/buggy_files/jannovar-cli/pom.xml
  • 0.16-SNAPSHOT BugSwarm/charite-jannovar-78561983/buggy_files/jped-cli/pom.xml
  • 0.16-SNAPSHOT BugSwarm/charite-jannovar-78561984/buggy_files/jannovar-cli/pom.xml
  • 0.16-SNAPSHOT BugSwarm/charite-jannovar-78561984/buggy_files/jped-cli/pom.xml
  • 0.16-SNAPSHOT BugSwarm/charite-jannovar-78561985/buggy_files/jannovar-cli/pom.xml
  • 0.16-SNAPSHOT BugSwarm/charite-jannovar-78561985/buggy_files/jped-cli/pom.xml

Size: 1.93 GB - Last synced: 12 days ago - Pushed: almost 5 years ago

tdurieux/pattern-detector-experiment
  • 0.18-SNAPSHOT benchmark/bugswarm/charite-jannovar-155352335/buggy_files/jannovar-cli/pom.xml
  • 0.23-SNAPSHOT benchmark/bugswarm/charite-jannovar-249719464/buggy_files/jannovar-cli/pom.xml
  • 0.23-SNAPSHOT benchmark/bugswarm/charite-jannovar-249719464/buggy_files/jannovar-filter/pom.xml
  • 0.23-SNAPSHOT benchmark/bugswarm/charite-jannovar-249719464/buggy_files/jannovar-stats/pom.xml
  • 0.23-SNAPSHOT benchmark/bugswarm/charite-jannovar-249719464/buggy_files/jannovar-vardbs/pom.xml
  • 0.16-SNAPSHOT benchmark/bugswarm/charite-jannovar-78561983/buggy_files/jannovar-cli/pom.xml
  • 0.16-SNAPSHOT benchmark/bugswarm/charite-jannovar-78561983/buggy_files/jped-cli/pom.xml
  • 0.16-SNAPSHOT benchmark/bugswarm/charite-jannovar-78561984/buggy_files/jannovar-cli/pom.xml
  • 0.16-SNAPSHOT benchmark/bugswarm/charite-jannovar-78561984/buggy_files/jped-cli/pom.xml
  • 0.16-SNAPSHOT benchmark/bugswarm/charite-jannovar-78561985/buggy_files/jannovar-cli/pom.xml
  • 0.16-SNAPSHOT benchmark/bugswarm/charite-jannovar-78561985/buggy_files/jped-cli/pom.xml

Size: 123 MB - Last synced: about 1 year ago - Pushed: over 4 years ago

haoziyeung/Exomiser Fork of exomiser/Exomiser
A Tool to Annotate and Prioritize Exome Variants
  • ${jannovar.version} exomiser-core/pom.xml

Size: 166 MB - Last synced: 9 months ago - Pushed: over 6 years ago

meng-ma-biomedical-AI/F29_Exomiser_Variants_using_HPO
  • ${jannovar.version} exomiser-core/pom.xml

Size: 241 MB - Last synced: 9 months ago - Pushed: over 2 years ago

meng-ma-biomedical-AI/Exomiser
  • ${jannovar.version} exomiser-core/pom.xml

Size: 241 MB - Last synced: 9 months ago - Pushed: over 2 years ago

Donwulff/Exomiser Fork of exomiser/Exomiser
A Tool to Annotate and Prioritize Exome Variants
  • ${jannovar.version} exomiser-core/pom.xml

Size: 245 MB - Last synced: 11 days ago - Pushed: over 2 years ago

novapyth/Exomiser Fork of exomiser/Exomiser
A Tool to Annotate and Prioritize Exome Variants
  • ${jannovar.version} exomiser-core/pom.xml

Size: 245 MB - Last synced: 8 months ago - Pushed: almost 4 years ago

novapyth/jannovar Fork of charite/jannovar
Annotation of VCF variants with functional impact and from databases (executable+library)
  • 0.39-SNAPSHOT jannovar-cli/pom.xml
  • 0.39-SNAPSHOT jannovar-filter/pom.xml
  • 0.39-SNAPSHOT jannovar-stats/pom.xml
  • 0.39-SNAPSHOT jannovar-vardbs/pom.xml

Size: 23.8 MB - Last synced: 8 months ago - Pushed: over 2 years ago

Bin-Guan/Squirls Fork of TheJacksonLaboratory/Squirls
Interpretable prioritization of splice variants in diagnostic next-generation sequencing
  • 0.35 pom.xml
  • squirls-cli/pom.xml

Size: 12.3 MB - Last synced: 8 months ago - Pushed: over 2 years ago

vdejager/Exomiser Fork of exomiser/Exomiser
A Tool to Annotate and Prioritize Exome Variants
  • ${jannovar.version} exomiser-core/pom.xml

Size: 245 MB - Last synced: 11 days ago - Pushed: almost 4 years ago

iQuxLE/acmgExomiser
adding v3 ACMG Assignments
  • ${jannovar.version} exomiser-core/pom.xml

Size: 274 MB - Last synced: 5 months ago - Pushed: 5 months ago