Ecosyste.ms: Repos

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Package Usage: pypi: PyVCF3

Variant Call Format (VCF) parser for Python
4 versions
Latest release: over 2 years ago
1 dependent package
3,694 downloads last month

View more package details: https://packages.ecosyste.ms/registries/pypi.org/packages/PyVCF3

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/dridk%2FPyVCF3

Dependent Repos 11

Rohan-cod/vcf2fhir Fork of elimuinformatics/vcf2fhir
  • >=1.0.3 requirements.txt

Size: 2.12 MB - Last synced: 14 days ago - Pushed: over 1 year ago

mzdravkov/polymorpheus
Integrated toolkit with web GUI for analysing genetic polymorphisms and their potential effects
  • * requirements.txt

Size: 730 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago

elimuinformatics/vcf2fhir
vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration
  • >=1.0.3 requirements.txt

Size: 2.1 MB - Last synced: 26 days ago - Pushed: over 1 year ago

next-crs4/VariantAlert
Tool to notify updates in genetic variant annotations.
  • * config/requirements.pip

Size: 1.7 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

jxtSamFrimpong/Oldway
a betway live roulette scrapper
  • ==1.0.3 requirements.txt

Size: 15.8 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

Mykrobe-tools/mykrobe
Antibiotic resistance prediction in minutes
  • >=1.0.3 requirements.txt
  • * setup.py

Size: 3.55 MB - Last synced: about 16 hours ago - Pushed: about 17 hours ago

msk-access/postprocessing_variant_calls
This repository helps with processing for variant calls made by a given caller
  • 1.0.3 poetry.lock
  • ^* pyproject.toml

Size: 1.43 MB - Last synced: 10 days ago - Pushed: 10 days ago

dbmi-bgm/higlass-data
Package that creates data files for CGAP's Higlass browsers
  • ^1.0.3 pyproject.toml

Size: 79.1 KB - Last synced: 9 days ago - Pushed: 11 months ago

Runsheng/primervcf
primderdiffer submodule: primervcf
  • >=1.0.3 setup.py

Size: 42 KB - Last synced: 6 days ago - Pushed: 12 months ago

KohlbacherLab/epytope
Python-based framework for computational immunomics
  • * setup.py

Size: 9.04 MB - Last synced: 27 days ago - Pushed: 4 months ago

pneerincx/take-it-easyconfigs Fork of molgenis/take-it-easyconfigs
  • >=1.0.3 p/PythonPlus/PythonPlus-3.10.4-GCCcore-11.3.0-v23.01.1-requirements.txt

Size: 1.62 MB - Last synced: about 2 hours ago - Pushed: about 2 hours ago

molgenis/take-it-easyconfigs
  • >=1.0.3 p/PythonPlus/PythonPlus-3.10.4-GCCcore-11.3.0-v23.01.1-requirements.txt

Size: 1.77 MB - Last synced: about 2 hours ago - Pushed: about 2 hours ago

ScottAMat/open-cravat
  • * setup.py

Size: 5.71 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

nuin/new_pipeline
  • ^1.0.3 pyproject.toml

Size: 115 MB - Last synced: 12 days ago - Pushed: 13 days ago

Schaudge/open-cravat Fork of KarchinLab/open-cravat
A modular annotation tool for genomic variants
  • * setup.py

Size: 7.26 MB - Last synced: about 1 month ago - Pushed: 10 months ago

Shicheng-Guo/bioinformatics-master Fork of tanquangduong/bioinformatics-master
Mastering bioinformatics techniques
  • * requirements.txt

Size: 879 KB - Last synced: 9 months ago - Pushed: 11 months ago

alina-bauer/epytope Fork of KohlbacherLab/epytope
Python-based framework for computational immunomics
  • * setup.py

Size: 8.96 MB - Last synced: 9 months ago - Pushed: about 1 year ago

Jeltje/open-cravat Fork of KarchinLab/open-cravat
A modular annotation tool for genomic variants
  • * setup.py

Size: 7.17 MB - Last synced: 4 months ago - Pushed: 4 months ago

contou-consulting/nextGen-genetics-genexusPgtAEndpoint Fork of BBaloglu/VCF_parser
PGT-A Web API for Genexus, Pulling Data from the VCF Files
  • * requirements.txt

Size: 312 KB - Last synced: 8 months ago - Pushed: 8 months ago

stuartmac/dash-bio-boards
  • ==1.0.3 requirements.txt

Size: 11.8 MB - Last synced: 8 months ago - Pushed: 8 months ago

martinghunt/mykrobe Fork of Mykrobe-tools/mykrobe
Cli tools for Mykrobe atlas and Mykrobe predictor
  • >=1.0.3 requirements.txt
  • * setup.py

Size: 3.69 MB - Last synced: 13 days ago - Pushed: 13 days ago

LukaszReszka/MBI3_resequencing
Zadanie implementacyjne z ćwiczenia 3 z przedmiotu MBI, semestr 2023Z
  • ==1.0.3 requirements.txt

Size: 6.92 MB - Last synced: about 1 month ago - Pushed: 5 months ago

dxkeac/Neo_ML
  • ==1.0.3 requirements.txt

Size: 0 Bytes - Last synced: 3 months ago - Pushed: 3 months ago

bioinformatics-policlinicogemelli/Varan-Release
  • * requirements.txt

Size: 369 KB - Last synced: about 1 month ago - Pushed: about 1 month ago