SimpleITK | pypi | Package Usage

NeeluMadan/Medical_image_Segmentation

Segmentation of Thoraci Region: U-Net and V-Net implementation

Size: 51.8 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

ljarabek/CSN_chexpert

Experiments with adaptive instance normalization on chexpert

Size: 10.1 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

komiyakomiyakomiya/dockerfile_kaggle

Size: 117 KB - Last synced: about 2 years ago - Pushed: about 2 years ago

k-zhuk/diploma_MD

MasterDegree diploma

Size: 50.4 MB - Last synced: almost 2 years ago - Pushed: about 2 years ago

jyotirmay123/BNN-for-Uncertainty-Estimation-of-Imaging-Biomarkers

m-project to n-dataset-setup to train 4 diff. bayesian NNs on 3 different datasets to estimate the effect of inclusion of uncertainty in post-analysis.

Size: 475 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

jacobmatthewmurray/dmhd

Notebook for Digital Medicine elective course on radiomics at University of Heidelberg.

Size: 445 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

qiuhuaqi/cardiac-motion

[STACOM-MICCAI 2019] Deep Learning Registration for Cardiac Motion Tracking

Size: 2.85 MB - Last synced: over 1 year ago - Pushed: over 1 year ago

daolamgit/2D-3D

Size: 176 KB - Last synced: 6 months ago - Pushed: over 2 years ago

lorenzomammana/flowers-recognition

Oxford 102 flower recognition with SOTA techniques

Size: 5.43 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

mkazmier/mbp-tech-talks-2020-medical-imaging

Code and slides from MBP Tech Talks 2020: Introduction to Medical Image Processing with Python

Size: 55.5 MB - Last synced: about 1 month ago - Pushed: almost 3 years ago

ShreyasDL/Liver-Cancer-Detection

Size: 36.9 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

m-petuhov/brain-classification

Size: 9.81 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

SavineMartens/BrainSegmention83Regions

Size: 195 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

thonguyen1302/Kaggle-Plant-Pathology-2020-FGVC7

Size: 24.9 MB - Last synced: about 1 year ago - Pushed: over 2 years ago

azhx/CORD19

WIP

Size: 999 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

samik1986/ML_Semantic_Segmenation_NMI

Size: 153 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

lab-midas/toolbox

Collection of different tools/utilities for medical imaging processing.

Size: 1.21 MB - Last synced: over 1 year ago - Pushed: over 2 years ago

tinahuang222/NucleiSegmentation

Instance nuclei segmentation

Size: 89.3 MB - Last synced: over 1 year ago - Pushed: over 2 years ago

Bala93/KD-MRI

A knowledge distillation framework for image reconstruction and image restoration in MRI workflow

Size: 999 KB - Last synced: 12 months ago - Pushed: over 1 year ago

stripathy/valiante_lab_abf_process

scripts for processing valiante lab abf files

Size: 386 MB - Last synced: about 1 month ago - Pushed: over 2 years ago

chobe111/medicalImageChanger

Size: 227 KB - Last synced: 20 days ago - Pushed: over 1 year ago

intelliChirp/Installation_Requirements

Use this to install all the packages needed to run SNAW

Size: 22.5 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

zrmzack/recommended-system

Size: 445 MB - Last synced: 12 months ago - Pushed: over 2 years ago

cstorm125/ds_env

Data Science Environment Setup

Size: 113 KB - Last synced: 2 months ago - Pushed: over 2 years ago

prosardar/skillfactory_rds

Repository for projects in the learning process

Size: 124 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

ankhafizov/MLTomography

This project is about application of machine learning techniques to Micro-CT

Size: 50.7 MB - Last synced: about 1 year ago - Pushed: over 2 years ago

ai-med/AbdomenNet

Size: 521 MB - Last synced: about 2 months ago - Pushed: over 2 years ago

Python Implementation of the CoLlAGe radiomics descriptor. CoLlAGe captures subtle anisotropic differences in disease pathologies by measuring entropy of co-occurrences of voxel-level gradient orientations on imaging computed within a local neighborhood.

Size: 2.83 MB - Last synced: 8 days ago - Pushed: over 1 year ago

plapa/prostatex-thesis

Size: 3.16 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

changlan/DeepLearningExamples Fork of NVIDIA/DeepLearningExamples

Deep Learning Examples

Size: 104 MB - Last synced: about 2 years ago - Pushed: about 2 years ago

aksg87/adpkd-segmentation-pytorch

Segmentation of kidneys on MRI in Autosomal Dominant Polycystic Kidney

Size: 53.7 MB - Last synced: over 1 year ago - Pushed: over 1 year ago

Petros9/md

Size: 29.1 MB - Last synced: over 1 year ago - Pushed: over 2 years ago

ouassit/UCapsNet

Size: 2.28 MB - Last synced: almost 2 years ago - Pushed: over 2 years ago

DIAGNijmegen/picai_eval

Evaluation of 3D detection and diagnosis performance —geared towards prostate cancer detection in MRI.

Size: 810 KB - Last synced: 13 days ago - Pushed: 4 months ago

Inria-Empenn/shanoir_downloader

Scripts to download, check and anonymize datasets

Size: 185 KB - Last synced: 3 months ago - Pushed: 3 months ago

ashishsingh18/kaapana Fork of kaapana/kaapana

Kaapana (from the hawaiian word kaʻāpana, meaning “distributor” or “part”) is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging.

Size: 91.9 MB - Last synced: 11 months ago - Pushed: about 1 year ago

trane293/mri-web-demo

A web demo based on Python and Flask to expose a state-of-art tumor segmentation for brain MRI scans. The framework is built for demo purposes only, and is simple enough to extend to other tasks.

Size: 5.12 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

jameszou/fbgan

Size: 602 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

jakob-tu/zebrafishframework

Size: 1.83 MB - Last synced: almost 2 years ago - Pushed: over 2 years ago

AustralianCancerDataNetwork/pydicer

PYthon Dicom Image ConvertER

Size: 15.6 MB - Last synced: 15 days ago - Pushed: about 2 months ago

kmader/QCTTest

Size: 4.88 KB - Last synced: about 2 years ago - Pushed: about 7 years ago

singhay/DeepPredictiveMotionTracking

Code for Deep Predictive Motion Tracking in Magnetic Resonance Imaging: Application to Fetal Imaging

Size: 10.9 MB - Last synced: about 2 years ago - Pushed: almost 3 years ago

srivathsapv/KrisprKreme

An efficient tool for CRISPR experiment design

Size: 111 MB - Last synced: over 1 year ago - Pushed: over 2 years ago

ricardoy/prova

prova

Size: 593 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

Svdvoort/PREDICT

Size: 35.2 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

billytaipei101/A-JUPYTER-notebooks

Size: 5.27 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

SuperElastix/SuperElastix

Official SuperElastix repository

Size: 2.97 MB - Last synced: about 1 year ago - Pushed: about 6 years ago

AndreaMovilla/Quality-Assurance

A package containing tools for automatic quantification analysis on PET images

Size: 92.8 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

huangmozhilv/u2net_torch

MICCAI2019:3D U$^2$-Net: A 3D Universal U-Net for Multi-Domain Medical Image Segmentation

Size: 2.38 MB - Last synced: over 1 year ago - Pushed: over 1 year ago

DIAGNijmegen/picai_baseline

Baseline AI models for 3D csPCa detection/diagnosis in bpMRI

Size: 1.14 MB - Last synced: about 2 months ago - Pushed: 3 months ago

DIAGNijmegen/picai_unet_gc_algorithm

U-Net model for 3D csPCa detection/diagnosis in bpMRI, deployable on grand-challenge.org

Size: 38.1 KB - Last synced: 12 months ago - Pushed: 12 months ago

shangqigao/BayeSeg

The official implementation of "Joint Modeling of Image and Label Statistics for Enhancing Model Generalizability of Medical Image Segmentation" via Pytorch

Size: 164 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

AIM-Harvard/pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

Size: 53.3 MB - Last synced: 4 days ago - Pushed: 3 months ago

PaddlePaddle/Serving

A flexible, high-performance carrier for machine learning models（『飞桨』服务化部署框架）

Size: 156 MB - Last synced: 24 days ago - Pushed: about 1 month ago

McGregorWwww/UCTransNet

Implementation of our AAAI'22 work: 'UCTransNet: Rethinking the Skip Connections in U-Net from a Channel-wise Perspective with Transformer'.

Size: 90 MB - Last synced: 12 months ago - Pushed: 12 months ago

frankkramer-lab/aucmedi

a framework for Automated Classification of Medical Images

Size: 40.6 MB - Last synced: 4 days ago - Pushed: 7 months ago

npnl/atlas2_grand_challenge

Evaluation Docker for the ATLAS2.0 Grand Challenge

Size: 32.2 KB - Last synced: 2 months ago - Pushed: almost 3 years ago

masadcv/FastGeodis

Fast Implementation of Generalised Geodesic Distance Transform for CPU (OpenMP) and GPU (CUDA)

Size: 25.6 MB - Last synced: 5 days ago - Pushed: about 1 year ago

xming521/CTAI

基于深度学习的肿瘤辅助诊断系统，以图像分割为核心，利用人工智能完成肿瘤区域的识别勾画并提供肿瘤区域的特征来辅助医生进行诊断。有完整的模型构建、后端架设、工业级部署和前端访问功能。TensorRT、PyTorch 、OpenCV 、Flask、Vue

Size: 4.06 MB - Last synced: 3 months ago - Pushed: 3 months ago

LeTruongVu2k1/MRI-synthesized-from-CT

Size: 3.01 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

lemoshu/MTCL

[MICCAI21, TMI22] Mean-Teacher-Assisted Confident Learning

Size: 6.49 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

getkeops/keops

KErnel OPerationS, on CPUs and GPUs, with autodiff and without memory overflows

Size: 21.4 MB - Last synced: 20 days ago - Pushed: 21 days ago

282857341/nnFormer

Size: 1.19 MB - Last synced: over 1 year ago - Pushed: almost 3 years ago

NVIDIA/DeepLearningExamples

State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.

Size: 104 MB - Last synced: 15 days ago - Pushed: 9 months ago

MNaseerSubhani/LSE

Size: 269 KB - Last synced: about 1 year ago - Pushed: over 2 years ago

abuchin/epilepsy_human_dg

Size: 19.3 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

MaximWeb1999/skillfactory_rds_Maksim_Makhonin

Size: 1.38 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

BhavyeML/video-classfier-actor-screentime

Size: 118 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

akuznetsova011/skillfactory_rds

Size: 2.69 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

igel2000/sf_rds

Real DataScience

Size: 6.21 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

rozanovsa/skillfactory_rds

Size: 18.8 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

adm-sglm/autosegmentation

Size: 41.1 MB - Last synced: about 2 years ago - Pushed: over 2 years ago

collab-uniba/Sentiment_Analysis_4SE_BERT

Sentiment Analysis using BERT on software engineering dataset

Size: 1.23 MB - Last synced: 2 months ago - Pushed: over 2 years ago

ssh6189/2020.05.26

Size: 45.9 KB - Last synced: about 2 years ago - Pushed: over 2 years ago

Keyn34/MOOSE Fork of ENHANCE-PET/MOOSE

MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemic TB whole-person research.The pipeline is based on nn-UNet and has the capability to segment 120 unique tissue classes from a whole-body 18F-FDG PET/CT image.

Size: 44 MB - Last synced: 8 days ago - Pushed: 8 days ago

Package Usage: pypi: SimpleITK

Dependent Repos 1,391

changlan/DeepLearningExamples Fork of NVIDIA/DeepLearningExamples

ashishsingh18/kaapana Fork of kaapana/kaapana

Keyn34/MOOSE Fork of ENHANCE-PET/MOOSE